Gene PputGB1_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2167 
Symbol 
ID5869956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2415318 
End bp2416571 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID641547292 
Productouter membrane porin 
Protein accessionYP_001668404 
Protein GI167033173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.049218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACA CAACTTGCAC GCTGGCCCGT TCGGCCCTGG CGGTGTCGCT GGCGCTTGGC 
CTGGGTTTGC CGGCCTGGGC CGAGGAGGGC GGCTTCCTTG AAGATGCCAA GGCCGGGCTG
ACACTGCGCA ACTACTACTT CAACCGCGAC TTCCGCGACG CAGGGGCGGC CAAGAGCAAG
GTCGAAGAAT GGGCCCAGGG TTTCATTTTC AAGTTCAGCT CTGGCTACAC ACCGGGGCTG
ATCGGTGTTG GCCTGGACGG CATCGCCATG TTCGGCGTGA AGCTGGACAG CGGCCGTGGT
ACCAGCGGCT CCGAACTGCT GCCGGTGCAC GATGACCGGC GTGCGGCCGA CGACTATGGT
CGCGCCGGTC TGGCGGCCAA GCTGCGTATT TGCGCGACCG AACTGAAGGT CGGTGAGCTG
TTGCCGGATA TTCCGCTGCT GCGCTACGAC GATGGCCGCC TGCTGCCACA GACGTTCCGC
GGGGCAATGC TCGATTCGCG CGAGATCGAA GGCCTGAGCC TGCAGGCCGG CCAGTATCGC
GAGGTGAGCC TGCGCAATTC TTCCGACATG CAGGACCTTT CCGCCTGGGC CGCGCCTGGG
GTGACTTCGG ATGGTTTCAA CTATGTCGGC GCCGAGTACC GCTTCAACCA GCAGCGCACG
CAGATCGGCG CCTGGCATTC GCAACTGGAG GACATTTACC AGCAAAGCTA CTTCAACCTG
CTGCACAGCC AGCGGCTGGG GGAGTGGACA CTGGCGGCCA ACCTTGGCTA CTTCATCGAC
CGGGATGATG GACAGGCGCG CATTGGTGAT ATCCAGAGCC GCACTGGCTA CGCTTTGCTG
TCGGCCTCGC ACAGTGGCCA TACCCTGTAC CTGGGGTTGC AGAAGGTCAG TGGCGACAGC
CCGTGGATGT CGGTGTATGG CAGTAGCGGG CGGACCTTGG GCAACGACAT GTTCAACGGC
AACTTCAGCA ACGCCGACGA GCGCTCGTGG CAAGTGCGCT ACGACTACAA TTTTGCCGCT
ATGGGTGTGC CTGGGTTGCT GGCCATGGTG CGCTACGGGC ATGGTGAAAA TGCCACCACG
GCGGCCGGCA GCAATGGCAA GGAGTGGGAG CGCGATACCG AAGTGAACTA CACCTTCCAG
AGCGGGGCGT TGAAGAACCT CAACATCCGC CTGAACAATG CGACCAACCG GCGCAGCTTC
AACAGTGATT TCGACCAGAC GCGGCTGATT GTCAGCTATC CGCTGACGTT GTAA
 
Protein sequence
MMHTTCTLAR SALAVSLALG LGLPAWAEEG GFLEDAKAGL TLRNYYFNRD FRDAGAAKSK 
VEEWAQGFIF KFSSGYTPGL IGVGLDGIAM FGVKLDSGRG TSGSELLPVH DDRRAADDYG
RAGLAAKLRI CATELKVGEL LPDIPLLRYD DGRLLPQTFR GAMLDSREIE GLSLQAGQYR
EVSLRNSSDM QDLSAWAAPG VTSDGFNYVG AEYRFNQQRT QIGAWHSQLE DIYQQSYFNL
LHSQRLGEWT LAANLGYFID RDDGQARIGD IQSRTGYALL SASHSGHTLY LGLQKVSGDS
PWMSVYGSSG RTLGNDMFNG NFSNADERSW QVRYDYNFAA MGVPGLLAMV RYGHGENATT
AAGSNGKEWE RDTEVNYTFQ SGALKNLNIR LNNATNRRSF NSDFDQTRLI VSYPLTL