Gene PputGB1_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2146 
Symbol 
ID5869935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2393660 
End bp2394037 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID641547271 
Productresponse regulator receiver protein 
Protein accessionYP_001668383 
Protein GI167033152 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.41399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000968824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG ATGCACAAGA TGTGGTTCTG GTCGTCGAGG ATGAACCGGC GATTCGCATG 
ATTTTGCGCG ACTACCTGGC GGGCGAGGGG TACCACGTAC TGGTGGCCGA AGATGGCGAG
CAGGCGTTCG CTATCCTGGC CAGCAAACCG CACCTGGACC TGATGGTGAC GGACTTCCGC
TTGCCGGGAG GTATCTCCGG GGTGGAGATT GCCGAGCCCG CCGTGAAGTT ACGACCGGAC
TTGAAGGTCA TCTTCATCAG CGGCTACCCG GCGGAGATTC TCGAGTCTGG CAGCCCGATC
ACCCGCAAGG CTCCGATCCT GGCCAAGCCA TTCGACCTGG ATACCTTGCA CGAGCAGATC
CAGGCACTGC TGCGCTGA
 
Protein sequence
MSEDAQDVVL VVEDEPAIRM ILRDYLAGEG YHVLVAEDGE QAFAILASKP HLDLMVTDFR 
LPGGISGVEI AEPAVKLRPD LKVIFISGYP AEILESGSPI TRKAPILAKP FDLDTLHEQI
QALLR