Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2146 |
Symbol | |
ID | 5869935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2393660 |
End bp | 2394037 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547271 |
Product | response regulator receiver protein |
Protein accession | YP_001668383 |
Protein GI | 167033152 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.41399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000968824 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAAG ATGCACAAGA TGTGGTTCTG GTCGTCGAGG ATGAACCGGC GATTCGCATG ATTTTGCGCG ACTACCTGGC GGGCGAGGGG TACCACGTAC TGGTGGCCGA AGATGGCGAG CAGGCGTTCG CTATCCTGGC CAGCAAACCG CACCTGGACC TGATGGTGAC GGACTTCCGC TTGCCGGGAG GTATCTCCGG GGTGGAGATT GCCGAGCCCG CCGTGAAGTT ACGACCGGAC TTGAAGGTCA TCTTCATCAG CGGCTACCCG GCGGAGATTC TCGAGTCTGG CAGCCCGATC ACCCGCAAGG CTCCGATCCT GGCCAAGCCA TTCGACCTGG ATACCTTGCA CGAGCAGATC CAGGCACTGC TGCGCTGA
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Protein sequence | MSEDAQDVVL VVEDEPAIRM ILRDYLAGEG YHVLVAEDGE QAFAILASKP HLDLMVTDFR LPGGISGVEI AEPAVKLRPD LKVIFISGYP AEILESGSPI TRKAPILAKP FDLDTLHEQI QALLR
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