| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2138 |
|---|
| Symbol | |
|---|
| ID | 5869927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2384099 |
|---|
| End bp | 2384458 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641547263 |
|---|
| Product | transcriptional regulator MvaT, P16 subunit |
|---|
| Protein accession | YP_001668375 |
|---|
| Protein GI | 167033144 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000737433 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00000269456 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGAC TTGCAGAGTT TCGTGCTGCC GAAAAAGCGC TCCAGGAACA GATGGCGCAA
CTGGAAGCGT TGAAAAAGGA TGCCGGCCTC AAACGCGAAA TCGAATTCGA GCAGAAACTA
GTCGGCCTGA TGAAAAGCTA TGACAAGAGC CTGCGCGATA TCATCGCCAT CCTCGACCCC
AAGGCAGTAG CCCGCGCTTC CAGCGCAGCG CCCAAGCAAC AACGCCGCCC GCGCGTGGTA
AAGGTGTACC AGAACCCACA CACCGGCGAG CGAATCGAGA CCAAAGGCGG CAACCACCGC
GGCCTCAAGG CCTGGAAAGA ACAGTACGGG GCCGCCACCG TGGAAAGCTG GGTACGCTGA
|
|---|
| Protein sequence | MSRLAEFRAA EKALQEQMAQ LEALKKDAGL KREIEFEQKL VGLMKSYDKS LRDIIAILDP
KAVARASSAA PKQQRRPRVV KVYQNPHTGE RIETKGGNHR GLKAWKEQYG AATVESWVR
|
|---|
| |