| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2127 |
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| Symbol | |
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| ID | 5869916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2376209 |
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| End bp | 2377852 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547252 |
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| Product | acetolactate synthase |
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| Protein accession | YP_001668364 |
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| Protein GI | 167033133 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.240788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000336537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCAAGG CAGCTGATCT CGTTGTGCAA TGTTTGGAAA GTGAAGGTGT TGAGTACGTG
TTCGGCATTC CCGGCGAGGA AAACCTCGAC CTGCTCGAAT CCCTGCGCAA GTCGAAGATC
AAGCTGGTAC TGACCCGTCA CGAGCAGTCT GCAGGTTTCA TGGCTGCCAC CTACGGCCGC
CTGACCGGCA AGACCGGCGT CAGCCTGTCG ACCCTCGGCC CTGGCGCCAC CAACCTGGTC
ACCGCCAGCG CCTATGCCTA CCTGGGCGGC ATGCCGATGA TGATGATCAC CGGGCAGAAG
CCGATCAAGA AGTCCAAGCA GGGCCGCTTC CAGATCATTG ACGTGTGCGG CATGATGGAC
CCCATCACCA AGTACACCCA CCAGTTCGCC TCGGCCGACA ACATCCCGTC GCGCATGCGC
GAGGCCTTCC GCCTGGCCGA AGAAGAAAAG CCGGGGGCGG TACACCTGGA ACTGCCGGAA
GACATCGCCG CCGAGCAGAC TGATGCGTTA CCGATCCCTC AGAGCCTCCA CCGTCGACCG
TTAGCCGAGC ACAAGGCAAT CGAAGCGGCG GTTGAGAAGC TGCACAGAGC CCGCAACCCT
ATCTTGGTGA TCGGTGCCGG TGCGAACCGC AAGATGACTG CCAAAGTCCT CAAGCAACTG
ATCGACGAGA CTCGAATCCC GTTCATCACA ACCCAATTGG GCAAAGGTGT GGTCGACGAG
CGCCATCCCT GCTTCCTCGG TAATGCTGCG CTTTCGGCCG GTGATTTTGT ACACCGTGCA
ATCGAAGCCG CCGACCTGAT CATCAACATC GGCCACGACG TGATCGAGAA GCCGCCGTTC
TTCATGGTTC GCGGCGGCAC CGAGGTCATC CACATCAACT TCCGTGCCGC CGAAGTCGAT
GCCGTGTACT TCCCGCAGGT TGAAGTGATC GGCGACATTG CCAACGCCGT GTGGCAGATC
AGCGAAGCGC TGAACGACAC GTCGCACTGG GACTTCACCC GCCTGATGGC CATTCGTGAA
GCCAACGAAG CACAGATCGC CGAAGGCGCC GACGATAACC GCTTCCCGGT CTACCCGCAG
CGCCTGGTGG CCGACATCCG TCGTGTACTG CCGTCCGAAG GCATCGTTGC CCTGGACAAC
GGCATCTACA AGATCTGGTT CGCCCGTAAC TACAAGGCGC ACAAGCCCAA CACCGTGCTG
CTGGACAACG CCCTGGCGAC CATGGGCGCC GGCTTGCCAT CGGCGATGGC CGCGCACCTG
GTGCACCCGG ACCGCCCGGT GATTTCGGTG TGCGGTGACG GTGGCTTCAT GATGAACAGC
CAGGAGCTGG AAACTGCGGT ACGTCTGGGC ATGCACATCA CCGTGGTGAT CCTGCGTGAC
GACGGCTATG GCATGATCCG CTGGAAGCAG GCCAACATGG GCTTCACCGA TTTCGGCCTG
GACTACGGCA ACCCGGACTT CGTCAAATAC GCCGAAGCTT ATGGCGCCAA TGGGTATCGC
GTAGAAAGTG CCGACTCGTT GATTCCGCTG CTTGACCACT GTGTCTCCAA CTCAGGGGTG
CACGTGATTG ATTGTCCGGT CGACTACAGC GATAACGACC GTATATTGAA CATTGATCTG
CGCGAGCGCA GCGCGGCGGT GTGA
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| Protein sequence | MAKAADLVVQ CLESEGVEYV FGIPGEENLD LLESLRKSKI KLVLTRHEQS AGFMAATYGR
LTGKTGVSLS TLGPGATNLV TASAYAYLGG MPMMMITGQK PIKKSKQGRF QIIDVCGMMD
PITKYTHQFA SADNIPSRMR EAFRLAEEEK PGAVHLELPE DIAAEQTDAL PIPQSLHRRP
LAEHKAIEAA VEKLHRARNP ILVIGAGANR KMTAKVLKQL IDETRIPFIT TQLGKGVVDE
RHPCFLGNAA LSAGDFVHRA IEAADLIINI GHDVIEKPPF FMVRGGTEVI HINFRAAEVD
AVYFPQVEVI GDIANAVWQI SEALNDTSHW DFTRLMAIRE ANEAQIAEGA DDNRFPVYPQ
RLVADIRRVL PSEGIVALDN GIYKIWFARN YKAHKPNTVL LDNALATMGA GLPSAMAAHL
VHPDRPVISV CGDGGFMMNS QELETAVRLG MHITVVILRD DGYGMIRWKQ ANMGFTDFGL
DYGNPDFVKY AEAYGANGYR VESADSLIPL LDHCVSNSGV HVIDCPVDYS DNDRILNIDL
RERSAAV
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