| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2126 |
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| Symbol | |
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| ID | 5869915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2375717 |
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| End bp | 2376109 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641547251 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001668363 |
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| Protein GI | 167033132 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.158455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000014394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGAA TCGCTATCCA CAGTGACCAG GCGCCGAAAG CTATTGGCCC GTATTCGCAA
GCAGTCCACA TGGGTGAGTT GGTGTTCTTG ACAGGGCAAA TCGCGCTTCA CCCTGAAAAG
ATGGAATTGG CCCAAGGCAT TGAAGCCCAA ACCATTCAGG TATTCGAGAA CCTCCAGTCA
GTAGCACAAG CCGCAGGCGG TAGTTTTTCT GACGTAGGAA AGCTCACTAT TTACCTCACG
GAACTCTCGC ACTTTGGTGT CGTGAACGAA ATAATGGGCC GTTACTTTGA AGCGCCTTAC
CCAGCACGAG CTACCGTGGG TGTATCGGCG CTCGCGTTGA ATGCTTTGGT TGCTATTGAC
GCCACCTTAG TGCTTCCTCG AAAAACAGCA TAA
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| Protein sequence | MSRIAIHSDQ APKAIGPYSQ AVHMGELVFL TGQIALHPEK MELAQGIEAQ TIQVFENLQS
VAQAAGGSFS DVGKLTIYLT ELSHFGVVNE IMGRYFEAPY PARATVGVSA LALNALVAID
ATLVLPRKTA
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