| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2054 |
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| Symbol | |
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| ID | 5869843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2305850 |
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| End bp | 2307187 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547179 |
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| Product | outer membrane porin |
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| Protein accession | YP_001668291 |
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| Protein GI | 167033060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.796025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGT TATTGCTGGC ACTGCCGCTA CTGGGCCTGG CCCCGCTCGC CCTGGCCGAC
ACTGCCCAGT CGCAGAGTAA TGGTTTTCTC GCGGACAGCA GCTGGAACCT GCTCAACCGC
AGCGTTTTCG ACCAGCGCGA CTACAAGCAC GGTGGGCGCA ACAGCGCAGC GCGCAATGCC
TACAAACCGC GCAACGAGCG TAATGGCAAG GCCGAGGAAT GGGCCTATGG TTTGATGGGT
ACCTTCCAGT CCGGGTTCAC CCAAGGCCTG ATCGGTGTCG GGGTCGATGC CCATGCCTAC
CTGGGCGTGC AACTCGACAG TGGTGGCGGG CGGGCGGGCA AGGCGCGCTT GCTCGGGGTC
GATAACGACG GGCATCCTAA AAACGAGTAC AGCCGCGCAG GTGCGGCACT GAAACTGCGC
GTGTCCGATA CGGTGCTGTC TTACGGCGAG CAACGGGTCA AGACGCCGGT GTTCAGTTCC
TCCGACAGTC GCCTGCTGCC CGAGACTGCC ACGGGCTTCT TTCTCACCAG CAATGAAGTC
GACAACCTCA AGCTGGTAGC CGGGCACTTC AACGAAAGCA CCGACCGCAA CGCTTCCAGC
CACGATCAGG GCTTTGTGGT GAACTACTCC AACGGCCGCC AGGGCAACAG CTTCGACCTG
GCCGGTGCCG TGTGGAACCC CGGCGCCGCC TTCAGCGGCA GCCTGTACAC CTCACGTTAC
GAGGACAGCT GGAACCAGCA CTACCTGGGC AGTACCCTCA GCCACGCCCT GGATGACCAG
CGCAGCATCA GCCTGGACCT CAACCTGTAT CGCACCACCG ACACCGGCAA AGCGCTGTCC
GGGCGCATCG ACAACACCAC CTGGAGCCTG CTCTCGCGCT ACAACCAGGG CCCACACAGC
TTCAGCCTGG GCTGGCAGCA AGTGGACGGC AACACGCCCT TCGACTACGT GACGCGCGGC
GCGATTTTCA TCGCCAACGC TGTGCAGATG TCGGACTTCA ACGCACCGAA CGAGAAGTCA
TGGCAGGCGC GCTACGACCT GAACATGGGC GCCTACGGCG TGCCGGGGTT GAACCTGGTG
GCGTTGTATG TGCGTGGCTT CGATATCGAT GGCACACACG TCGACCCCAA TGGCGGGTAT
GCGTACTTGG GGTATGGCAA GGGTGGCAAG CATTGGGAGC GCGACCTGGA AGCGCGTTAC
GTGGTGCAGA GTGGCAAGGC CAAAGGCACG ACGTTCTCGG TCAGGCATAA CGTGCACCGG
GGGAACACGG CGCAGGCGGA GCTGGATGGC GACCAGATAC GGCTGGCGGT GGAATGGCCG
TTGTCAGGCG GGTTCTGA
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| Protein sequence | MNRLLLALPL LGLAPLALAD TAQSQSNGFL ADSSWNLLNR SVFDQRDYKH GGRNSAARNA
YKPRNERNGK AEEWAYGLMG TFQSGFTQGL IGVGVDAHAY LGVQLDSGGG RAGKARLLGV
DNDGHPKNEY SRAGAALKLR VSDTVLSYGE QRVKTPVFSS SDSRLLPETA TGFFLTSNEV
DNLKLVAGHF NESTDRNASS HDQGFVVNYS NGRQGNSFDL AGAVWNPGAA FSGSLYTSRY
EDSWNQHYLG STLSHALDDQ RSISLDLNLY RTTDTGKALS GRIDNTTWSL LSRYNQGPHS
FSLGWQQVDG NTPFDYVTRG AIFIANAVQM SDFNAPNEKS WQARYDLNMG AYGVPGLNLV
ALYVRGFDID GTHVDPNGGY AYLGYGKGGK HWERDLEARY VVQSGKAKGT TFSVRHNVHR
GNTAQAELDG DQIRLAVEWP LSGGF
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