| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2044 |
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| Symbol | |
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| ID | 5869833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2293331 |
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| End bp | 2296477 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547169 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001668281 |
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| Protein GI | 167033050 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.668471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.474032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC GCCTGATTCA ATTCGCCATC GAGCAGCGCC TGGTGGTGAT GCTGGCCGTG
GTCCTGATGG CCGCGGTGGG TATCCACAGC TACCAGAAAC TGCCGATCGA CGCTGTGCCG
GACATTACCA ACGTCCAGGT GCAGATCAAC ACCGCCGCCC CCGGTTATTC GCCGCTGGAG
ACCGAGCAGC GCATCACCTT TGCCATCGAA ACCGCCATGG CTGGCCTGCC TGGGCTGAAG
CAGACCCGCT CGCTGTCGCG TTCGGGCTTG TCGCAGGTTA CGGTGATTTT CGATGATGGC
ACCGACGTGT TCTTCGCCCG CCAGTTGGTC AACGAGCGCC TGCAAGTGGC TCGCGAGCAA
TTGCCCGAGG GGATAGAAGC GGGCATGGGG CCGATCTCCA CCGGGCTGGG GGAAATCTTC
CTGTGGACGG TGGAAGCCGA GGAGGGGGCG CTCAAGGAAG ACGGCACACC CTACACCCCA
ACCGACCTGC GGGTGATCCA GGACTGGATC ATCAAGCCAC AGCTGCGCAA TGTGCCGGGG
GTGGCCGAGG TCAACAGCAT TGGTGGCCAT GCCAAGCAAT ACCTGATTGC GCCGGAGCCC
AAACGCCTGG CGGCCTACAA GCTCACCCTC AATGACCTGA TCGCGGCGTT GGAACGCAAC
AACGCCAACG TCGGCGCCGG TTACATCGAG CGCAATGGCG AACAGTTGCT GATTCGCGCA
CCGGGCCAGG TGGCGTCGGC CGAAGACATC GCCAACATTG TCATCTCCAG CGTCGATGGC
ACGCCAATCC GTGTCAGCCA TGTTGCCGAG GTTGGCCTGG GCGAAGAGCT TCGCTCGGGT
GCGGCCACCG AAAATGGCCG GGAGGTGGTG CTGGGCACGG TGTTCATGCT GATTGGCGAG
AACAGCCGCA CGGTGTCCCA GGCGGTCGCC GCCAAATTGG TCGAGATCAA CCGCAACCTG
CCCAAGGGGG TGGTGGCGGT GACCGTGTAC GACCGCACCA ACCTGGTGGA AAAAGCCATC
GCCACGGTGA AGAAGAACCT GATCGAAGGG GCCATCCTGG TCATTGCCGT GCTGTTCCTG
TTCCTGGGCA ACATCCGCGC CGCACTGATC ACCGCAATGG TCATCCCGCT GTCGATGCTG
TTCACTTTCA CTGGCATGTT CAGCAACAAG GTCAGCGCCA ACTTGATGAG CCTAGGCGCG
CTGGACTTCG GCATCATCGT CGACGGTGCG GTGGTGATCG TGGAAAACGC CATCCGCCGC
CTGGCCCATG CCCAGCAACG CCATGGCCGC ATGCTGACCC GCAGCGAGCG CTTCCATGAA
GTGTTCGCCG CCGCCCGCGA GGCGCGCCGG CCGCTGATCT ACGGGCAGTT GATCATCATG
GTGGTGTACC TGCCGATCTT TGCCCTGACC GGTGTCGAGG GCAAGATGTT CCACCCCATG
GCCTTTACCG TGGTCATGGC CTTGCTCGGC GCCATGATTC TTTCGGTCAC GTTCGTGCCG
GCGGCCATTG CCCTGTTCGT CACCGGCAAG GTCAAGGAAG AAGAAGGCCT GGTGATGCGC
ACGGCGCGCC AGCGTTATGC ACCGGTGCTG GCCTGGGTGC TGGGCCGGCG CAAGGTGGCG
TTTGCCGCCG CTGCCGCCCT GGTGCTGTTG TCCGGGGTCA TGGCCAGCCG CATGGGCAGC
GAGTTCATCC CCAGCCTCAG CGAGGGCGAC TTTGCCTTGC AGGCCCTGCG TGTGCCGGGT
ACCAGCCTGT CGCAGTCGGT GGACATGCAG CAGCGCCTGG AGCAGGCGAT CATCGCCCAG
GTGCCGGAGG TGGAGCGGGT GTTCGCCCGT ACCGGTACTG CCGAAATCGC CTCTGACCCG
ATGCCACCGA ACATCTCCGA CGCCTATGTA ATGTTGCGCC CGCGCGAGCA GTGGGTAGAT
CCGGGCAAGC CGCGTGACGA ACTGATCGCC GAGGTGCAAC GTGCTGCCGC CAGCGTACCG
GGCAGCAACT ACGAGCTGTC GCAGCCGATC CAGTTGCGTT TCAACGAGCT GATTTCCGGG
GTGCGCAGCG ATGTGGCGGT GAAGTTGTTC GGTGATGACA TGGATGTGCT CAACCGCACC
GCCGCGCAAA TCGCCAGCAG CCTGCAAGGT GTCGCGGGTG CGTCCGAGGT GAAGGTGGAG
CAAACCACCG GCCTGCCGGT GCTGACCATC GACATCGACC GCGACAAGGC GGCGCGCCAT
GGCCTGAACG TGGGCGACGT GCAGGACGCC ATCGCCATTG CCGTGGGTGG CCGCACGGCA
GGCACACTGT ATGAAGGCGA CCGGCGCTTC GACATGGTGG TGCGCCTGCC CGAAACCTTG
CGCACGGATG TGGACGGGCT TTCCAGCCTG CTGATTCCGG TACCGGCCAG TGCCACTGCG
GGCGCTGCGC AAATCGGCTT TATCCCGCTG TCTCAGGTGG CCACGTTGAA CCTGCAACTG
GGGCCTAACC AGGTCAGCCG CGAGGATGGC AAGCGGGTGG TGGTGGTCAG CGCCAACGTT
CGCGGGCGTG ACCTGGGCTC GTTCGTGGAG GATGCCGAAC AGACCCTGAT CCAGCAGGTG
CAGATTCCAC CGGGTTACTG GACACGCTGG GGTGGGCAGT TCGAACAGTT GCAATCGGCA
ACCGAGCGCC TGCAGGTGGT GGTGCCGGTA GCCTTGCTGC TGGTCATGGC ACTGTTGCTG
ATGATGTTCA ATAACCTCAG GGATGGCTTG CTGGTGTTCA CCGGTATTCC GTTTGCCCTG
ACCGGTGGGG TGCTGGCGCT GTGGTTGCGG GACATCCCGT TGTCCATCTC GGCGGGTGTG
GGTTTCATTG CCCTGTCGGG GGTGGCGGTG CTCAACGGGC TGGTGATGAT CGCCTTTATC
CGTGGCCTGC GCGAAGAAGG GCGCCCGTTG CGGGTGGCGG TAGAAGAGGG CGCCTTGACG
CGCTTGCGGC CGGTGCTGAT GACCGCGCTG GTGGCTTCGC TGGGGTTCAT TCCAATGGCC
TTGGCCACGG GGACCGGGGC TGAGGTGCAG CGGCCGCTGG CGACGGTGGT GATTGGTGGG
ATCCTGTCTT CTACTGCGTT GACGTTGCTG GTTCTGCCTG CGTTGTATCA GTGGGCGTAT
CGGCGGGAAG AGGCGCAAGA GGGCTGA
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| Protein sequence | MFERLIQFAI EQRLVVMLAV VLMAAVGIHS YQKLPIDAVP DITNVQVQIN TAAPGYSPLE
TEQRITFAIE TAMAGLPGLK QTRSLSRSGL SQVTVIFDDG TDVFFARQLV NERLQVAREQ
LPEGIEAGMG PISTGLGEIF LWTVEAEEGA LKEDGTPYTP TDLRVIQDWI IKPQLRNVPG
VAEVNSIGGH AKQYLIAPEP KRLAAYKLTL NDLIAALERN NANVGAGYIE RNGEQLLIRA
PGQVASAEDI ANIVISSVDG TPIRVSHVAE VGLGEELRSG AATENGREVV LGTVFMLIGE
NSRTVSQAVA AKLVEINRNL PKGVVAVTVY DRTNLVEKAI ATVKKNLIEG AILVIAVLFL
FLGNIRAALI TAMVIPLSML FTFTGMFSNK VSANLMSLGA LDFGIIVDGA VVIVENAIRR
LAHAQQRHGR MLTRSERFHE VFAAAREARR PLIYGQLIIM VVYLPIFALT GVEGKMFHPM
AFTVVMALLG AMILSVTFVP AAIALFVTGK VKEEEGLVMR TARQRYAPVL AWVLGRRKVA
FAAAAALVLL SGVMASRMGS EFIPSLSEGD FALQALRVPG TSLSQSVDMQ QRLEQAIIAQ
VPEVERVFAR TGTAEIASDP MPPNISDAYV MLRPREQWVD PGKPRDELIA EVQRAAASVP
GSNYELSQPI QLRFNELISG VRSDVAVKLF GDDMDVLNRT AAQIASSLQG VAGASEVKVE
QTTGLPVLTI DIDRDKAARH GLNVGDVQDA IAIAVGGRTA GTLYEGDRRF DMVVRLPETL
RTDVDGLSSL LIPVPASATA GAAQIGFIPL SQVATLNLQL GPNQVSREDG KRVVVVSANV
RGRDLGSFVE DAEQTLIQQV QIPPGYWTRW GGQFEQLQSA TERLQVVVPV ALLLVMALLL
MMFNNLRDGL LVFTGIPFAL TGGVLALWLR DIPLSISAGV GFIALSGVAV LNGLVMIAFI
RGLREEGRPL RVAVEEGALT RLRPVLMTAL VASLGFIPMA LATGTGAEVQ RPLATVVIGG
ILSSTALTLL VLPALYQWAY RREEAQEG
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