Gene PputGB1_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2037 
Symbol 
ID5869826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2285921 
End bp2287345 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID641547162 
Producttranscriptional regulator 
Protein accessionYP_001668274 
Protein GI167033043 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAT TACATCCAGA CTCCTCAACC CCGCTGGTCA ACCAGATCAT CGACGGGCTG 
CGCGAGCTGA TCGACAACCA GACCCTCAAG CCAGGCGCCA AGGTCCCGTC GATCCGCGCC
TTTGCCGCGA GCTATTCGGT GAGCACCTTC ACCGTGGTCG AGGCCTACGA CCGGCTGGTC
GCCCAAGGGC TGCTGGTGAG CCGTGGCAAT GCGGGGTTCT TCGTCAACCG TGCGGCGGGC
GAACTGCTGG AGCAGCACAA CGCCGAGGCC GACACCAGTC GACCAACGTT CAACTCCGAG
TGGTACCTGC AGCAGATCTT CGAAATCCGC CAACTGCCGT ACAAGCCGGG GTGCGGCTGG
CTGCCCAACG ACTGGATGTA CGAAGACGGC CTGCGCCGTG GCCTGCGCCA GGTAGCCGGC
AGCCCCCTGG AGCTGTCGGG CTACGGCGAC CCCATGGGCC TGATGGAGCT GCGTGCACTG
ACTGCGCAGA ACCTGCAACA GGAGCTGTCG ATCGTCGCCA ACCCGGCGCA GCTGATGCTC
ACCCACGGCG CCAGCCAGGC CCTGGACCTG GCCGCACGCA CGCTGGTGCG CCCTGGCGAC
GTGGTGCTGG TGGACGACCC CGGCTACCCC AACCTGATGA GCATCCTGCG CACCCAGGGC
GCCACCCTGG TCGGCGTGCC GCGCACCCCC GCCGGCTACG ACCTGAACCA GCTGGAGCAG
CTGCTTACCC ACCACCGCCC AACCGCGTTC TTCACCCAGC CGCACCTGCA CAGCCCGACC
TGCTCGCGCA CCCCACTGCC GCAGTTGCAC CGGCTGTTGC AACTGGCCAG CCAGCACGGT
TTCCGCCTTG TGGAGAACAA CCTGTACGCC GACATGGTCA CCGAGCCGCA ACCGTGCCTG
GCCAGCCTCG ACCACTTGCA ACAGGTGGTG TACGTGGGTA GTTACTCCAA GAGCATTTCA
CCCAACGTGC GGGTCGGCTA CATGCTGGCC AACCCCGAAC TGATGCAGAA ATTGCTGCAC
CTGAAAATGC GCTCGGGCCT GACCACCTCG CAGGTAATGG AGCGTGTGGT GTACGCGGCG
ATCATCGACG GCCGCTGGCG CAAGCACCTC AAGCGCCTGC GCCAGCGCCT AGCCGAAGCC
CATCAGGAAG TTGGCCGGCA TTTGCATCGA TTGGGCTTTG AACTGTTCAC CGAATCGGAT
GAGGGCATGT ACATCTGGAC TCGCCACCCG GCGATTCCCG ACAGCGCGGC GTTGCTGGAT
GACGCGCTGG AAAAAGGCAT CATGCTCGGG CCTGGTCAGT TGTTCATGGT CGATGCCAAG
GCCACCGGGT GGATGCGGTT CAATGTGGCG TTCAGTACCG ATCCGGCGAT GTGGGAGTTG
CTGGAGAAGG TCTTCGTCAA GCATGTGCGG CGGGGTGGGA TGTAG
 
Protein sequence
MFELHPDSST PLVNQIIDGL RELIDNQTLK PGAKVPSIRA FAASYSVSTF TVVEAYDRLV 
AQGLLVSRGN AGFFVNRAAG ELLEQHNAEA DTSRPTFNSE WYLQQIFEIR QLPYKPGCGW
LPNDWMYEDG LRRGLRQVAG SPLELSGYGD PMGLMELRAL TAQNLQQELS IVANPAQLML
THGASQALDL AARTLVRPGD VVLVDDPGYP NLMSILRTQG ATLVGVPRTP AGYDLNQLEQ
LLTHHRPTAF FTQPHLHSPT CSRTPLPQLH RLLQLASQHG FRLVENNLYA DMVTEPQPCL
ASLDHLQQVV YVGSYSKSIS PNVRVGYMLA NPELMQKLLH LKMRSGLTTS QVMERVVYAA
IIDGRWRKHL KRLRQRLAEA HQEVGRHLHR LGFELFTESD EGMYIWTRHP AIPDSAALLD
DALEKGIMLG PGQLFMVDAK ATGWMRFNVA FSTDPAMWEL LEKVFVKHVR RGGM