Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2037 |
Symbol | |
ID | 5869826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2285921 |
End bp | 2287345 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547162 |
Product | transcriptional regulator |
Protein accession | YP_001668274 |
Protein GI | 167033043 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAT TACATCCAGA CTCCTCAACC CCGCTGGTCA ACCAGATCAT CGACGGGCTG CGCGAGCTGA TCGACAACCA GACCCTCAAG CCAGGCGCCA AGGTCCCGTC GATCCGCGCC TTTGCCGCGA GCTATTCGGT GAGCACCTTC ACCGTGGTCG AGGCCTACGA CCGGCTGGTC GCCCAAGGGC TGCTGGTGAG CCGTGGCAAT GCGGGGTTCT TCGTCAACCG TGCGGCGGGC GAACTGCTGG AGCAGCACAA CGCCGAGGCC GACACCAGTC GACCAACGTT CAACTCCGAG TGGTACCTGC AGCAGATCTT CGAAATCCGC CAACTGCCGT ACAAGCCGGG GTGCGGCTGG CTGCCCAACG ACTGGATGTA CGAAGACGGC CTGCGCCGTG GCCTGCGCCA GGTAGCCGGC AGCCCCCTGG AGCTGTCGGG CTACGGCGAC CCCATGGGCC TGATGGAGCT GCGTGCACTG ACTGCGCAGA ACCTGCAACA GGAGCTGTCG ATCGTCGCCA ACCCGGCGCA GCTGATGCTC ACCCACGGCG CCAGCCAGGC CCTGGACCTG GCCGCACGCA CGCTGGTGCG CCCTGGCGAC GTGGTGCTGG TGGACGACCC CGGCTACCCC AACCTGATGA GCATCCTGCG CACCCAGGGC GCCACCCTGG TCGGCGTGCC GCGCACCCCC GCCGGCTACG ACCTGAACCA GCTGGAGCAG CTGCTTACCC ACCACCGCCC AACCGCGTTC TTCACCCAGC CGCACCTGCA CAGCCCGACC TGCTCGCGCA CCCCACTGCC GCAGTTGCAC CGGCTGTTGC AACTGGCCAG CCAGCACGGT TTCCGCCTTG TGGAGAACAA CCTGTACGCC GACATGGTCA CCGAGCCGCA ACCGTGCCTG GCCAGCCTCG ACCACTTGCA ACAGGTGGTG TACGTGGGTA GTTACTCCAA GAGCATTTCA CCCAACGTGC GGGTCGGCTA CATGCTGGCC AACCCCGAAC TGATGCAGAA ATTGCTGCAC CTGAAAATGC GCTCGGGCCT GACCACCTCG CAGGTAATGG AGCGTGTGGT GTACGCGGCG ATCATCGACG GCCGCTGGCG CAAGCACCTC AAGCGCCTGC GCCAGCGCCT AGCCGAAGCC CATCAGGAAG TTGGCCGGCA TTTGCATCGA TTGGGCTTTG AACTGTTCAC CGAATCGGAT GAGGGCATGT ACATCTGGAC TCGCCACCCG GCGATTCCCG ACAGCGCGGC GTTGCTGGAT GACGCGCTGG AAAAAGGCAT CATGCTCGGG CCTGGTCAGT TGTTCATGGT CGATGCCAAG GCCACCGGGT GGATGCGGTT CAATGTGGCG TTCAGTACCG ATCCGGCGAT GTGGGAGTTG CTGGAGAAGG TCTTCGTCAA GCATGTGCGG CGGGGTGGGA TGTAG
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Protein sequence | MFELHPDSST PLVNQIIDGL RELIDNQTLK PGAKVPSIRA FAASYSVSTF TVVEAYDRLV AQGLLVSRGN AGFFVNRAAG ELLEQHNAEA DTSRPTFNSE WYLQQIFEIR QLPYKPGCGW LPNDWMYEDG LRRGLRQVAG SPLELSGYGD PMGLMELRAL TAQNLQQELS IVANPAQLML THGASQALDL AARTLVRPGD VVLVDDPGYP NLMSILRTQG ATLVGVPRTP AGYDLNQLEQ LLTHHRPTAF FTQPHLHSPT CSRTPLPQLH RLLQLASQHG FRLVENNLYA DMVTEPQPCL ASLDHLQQVV YVGSYSKSIS PNVRVGYMLA NPELMQKLLH LKMRSGLTTS QVMERVVYAA IIDGRWRKHL KRLRQRLAEA HQEVGRHLHR LGFELFTESD EGMYIWTRHP AIPDSAALLD DALEKGIMLG PGQLFMVDAK ATGWMRFNVA FSTDPAMWEL LEKVFVKHVR RGGM
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