| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1991 |
|---|
| Symbol | |
|---|
| ID | 5869781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2239187 |
|---|
| End bp | 2239879 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641547118 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_001668230 |
|---|
| Protein GI | 167032999 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.823633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACA TCGCTCGCCA AGCTTTTCTC CACGGCGCCA TCGCCATTCT CCCGTTGTCC
CTGGCCGTCG CCCCCTGGGG CCTGCTGGCC GGTTCCATGG CCATCGAGGC CAACCTCAGC
GCCTGGCAGG GGCAAGGGCT GTCGGCCATC GTCTTCGCTG GTGCCGCGCA ACTGGTGGCT
ATCGGCATGC TCAAGGGCGG CGCGAACCTG GCGTCGATCC TGCTCACCAC CCTGCTGCTG
ACCTCTCAGC ACCTGCTGTA TGGCCTGTCG ATGCGCCCGG TACTGTCCAG CCAGCCGCTG
CGCTGGCGCT TGGGCCTGGG CTTTCTGCTG ACCGACGAGT TCTTCGCCCT GACCAGCCAG
TACGACCAGC AGCAGTTCAA CCGCTGGTAT GCCCTTGGGG TGGGCCTGAC CTTCTACATC
GCCTGGAACC TGTTCACCCT GGCCGGCATC CTGCTGGGCC AGAGCATTCC CCACCTGGAC
CAGTTCGGCC TGGATTTCTC CATCGTCGCC ACCTTCGTCG CCCTGATCGC ACCGCTGGTG
CGCAACCTGG CCACGGTGGT GTGCGTCGCC GTGTCGCTGT TCTGCTCGGT GCTGTTCAGC
TACTGGCATT GGGAAACCGC CCTGGTCGCC GCAGGCCTGC TGGGCATGAG CGCCGGGTTC
ATCTGTCAGA AATTCACCGG AGCCCGCGCA TGA
|
|---|
| Protein sequence | MPHIARQAFL HGAIAILPLS LAVAPWGLLA GSMAIEANLS AWQGQGLSAI VFAGAAQLVA
IGMLKGGANL ASILLTTLLL TSQHLLYGLS MRPVLSSQPL RWRLGLGFLL TDEFFALTSQ
YDQQQFNRWY ALGVGLTFYI AWNLFTLAGI LLGQSIPHLD QFGLDFSIVA TFVALIAPLV
RNLATVVCVA VSLFCSVLFS YWHWETALVA AGLLGMSAGF ICQKFTGARA
|
|---|
| |