Gene PputGB1_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1964 
Symbol 
ID5869754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2209092 
End bp2210240 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID641547091 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_001668203 
Protein GI167032972 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0593717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA CGCTGTCCCC CCTGCAGATC GACTGCGACT TCGATTCCGG CAACATCCAG 
GTGCTGGATG CCAGCAACCC GGCCCAGGTA CACCTGGCCA TCCGCCCGGA CACCCACAGC
GGCCACTACC AATGGTTCCA TTTCAAGGTC AGCGGGCTCA CCCCGGGGCA GGTGCATCGC
TTCAGCCTCG ACAACGCGTC TGGCTCCTCG TACAAGAACG CGTGGAGCGG CTACAACGCG
GTGGCCAGCT ACGACCAGCA GAGCTGGTTC CGCGTGCCCA GCCGGTTCGA CGGTACGGCG
CTGTCGTTCG AGGTAAAGGC TGAACAGGAA CATATCTGGT TCGCCTACTT CGAGCCCTTC
TCTCGCGCCC GACACAACCA GCTGATCGAA CGTGCACGGC AACTGCCGGG GGTCGAGTTG
CTGGCCAGCG GCCGCAGTGT CCAAGGCCGC GATATCCCGC TGCTGCGTGC CGGTGACGGT
GCAGATGGCA AGCGCAAGCT GTGGCTGATT GCCCAGCAAC ACCCAGGCGA GCACATGGCC
GAATGGTTCA TGGAAGGCGT GATCGACCGC CTGCAGGCCA ACGATGCAGT GGTTAAGCAA
TTGCTGGCCA AGGCTGACCT TTACCTGATC CCCAACATGA ACCCCGACGG CGCCTTCCTC
GGCCACCTGC GTACCAACTT CAAGGGCAAG GACCTCAACC GCGCCTGGCA GGACGCCAGC
ATCGAACTGA GCCCAGAGGT GTTCTTTGCT CAGGCGCAGA TGAAGCAGTA CGGCGTGGAC
GCGTTCATCG ACGTGCATGG TGACGAAGAG ATTCCGCACG TGTTCACCGC CGCGTGCGAG
GGCAACCCAG GCTACACCCC GCGACTGGAA AAACTCGAAG CGCAGTTTCG CAATACCTTG
TGCAGCGTGA CCCGCGACTT TCAGACCGTG CACGGCTATA CCCGCAACGA GCCTGGCCAG
GCGAATACGA CGCTGGCCTG CAATGCCGTG GGCATGGCAC ATGACTGCCT GTCGCTAACG
CTGGAGATGC CATTCAAGGA CCATGACGAC GCGCCCGATG CGGTAACCGG CTGGTCGGGG
GCACGCTCGA AGGCCCTGGC CGGGGCGGTG CTGGAGACCC TGGCAAAAAT GGTGGGCGAT
TTGCGCTGA
 
Protein sequence
MTVTLSPLQI DCDFDSGNIQ VLDASNPAQV HLAIRPDTHS GHYQWFHFKV SGLTPGQVHR 
FSLDNASGSS YKNAWSGYNA VASYDQQSWF RVPSRFDGTA LSFEVKAEQE HIWFAYFEPF
SRARHNQLIE RARQLPGVEL LASGRSVQGR DIPLLRAGDG ADGKRKLWLI AQQHPGEHMA
EWFMEGVIDR LQANDAVVKQ LLAKADLYLI PNMNPDGAFL GHLRTNFKGK DLNRAWQDAS
IELSPEVFFA QAQMKQYGVD AFIDVHGDEE IPHVFTAACE GNPGYTPRLE KLEAQFRNTL
CSVTRDFQTV HGYTRNEPGQ ANTTLACNAV GMAHDCLSLT LEMPFKDHDD APDAVTGWSG
ARSKALAGAV LETLAKMVGD LR