Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1964 |
Symbol | |
ID | 5869754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2209092 |
End bp | 2210240 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547091 |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_001668203 |
Protein GI | 167032972 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0593717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA CGCTGTCCCC CCTGCAGATC GACTGCGACT TCGATTCCGG CAACATCCAG GTGCTGGATG CCAGCAACCC GGCCCAGGTA CACCTGGCCA TCCGCCCGGA CACCCACAGC GGCCACTACC AATGGTTCCA TTTCAAGGTC AGCGGGCTCA CCCCGGGGCA GGTGCATCGC TTCAGCCTCG ACAACGCGTC TGGCTCCTCG TACAAGAACG CGTGGAGCGG CTACAACGCG GTGGCCAGCT ACGACCAGCA GAGCTGGTTC CGCGTGCCCA GCCGGTTCGA CGGTACGGCG CTGTCGTTCG AGGTAAAGGC TGAACAGGAA CATATCTGGT TCGCCTACTT CGAGCCCTTC TCTCGCGCCC GACACAACCA GCTGATCGAA CGTGCACGGC AACTGCCGGG GGTCGAGTTG CTGGCCAGCG GCCGCAGTGT CCAAGGCCGC GATATCCCGC TGCTGCGTGC CGGTGACGGT GCAGATGGCA AGCGCAAGCT GTGGCTGATT GCCCAGCAAC ACCCAGGCGA GCACATGGCC GAATGGTTCA TGGAAGGCGT GATCGACCGC CTGCAGGCCA ACGATGCAGT GGTTAAGCAA TTGCTGGCCA AGGCTGACCT TTACCTGATC CCCAACATGA ACCCCGACGG CGCCTTCCTC GGCCACCTGC GTACCAACTT CAAGGGCAAG GACCTCAACC GCGCCTGGCA GGACGCCAGC ATCGAACTGA GCCCAGAGGT GTTCTTTGCT CAGGCGCAGA TGAAGCAGTA CGGCGTGGAC GCGTTCATCG ACGTGCATGG TGACGAAGAG ATTCCGCACG TGTTCACCGC CGCGTGCGAG GGCAACCCAG GCTACACCCC GCGACTGGAA AAACTCGAAG CGCAGTTTCG CAATACCTTG TGCAGCGTGA CCCGCGACTT TCAGACCGTG CACGGCTATA CCCGCAACGA GCCTGGCCAG GCGAATACGA CGCTGGCCTG CAATGCCGTG GGCATGGCAC ATGACTGCCT GTCGCTAACG CTGGAGATGC CATTCAAGGA CCATGACGAC GCGCCCGATG CGGTAACCGG CTGGTCGGGG GCACGCTCGA AGGCCCTGGC CGGGGCGGTG CTGGAGACCC TGGCAAAAAT GGTGGGCGAT TTGCGCTGA
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Protein sequence | MTVTLSPLQI DCDFDSGNIQ VLDASNPAQV HLAIRPDTHS GHYQWFHFKV SGLTPGQVHR FSLDNASGSS YKNAWSGYNA VASYDQQSWF RVPSRFDGTA LSFEVKAEQE HIWFAYFEPF SRARHNQLIE RARQLPGVEL LASGRSVQGR DIPLLRAGDG ADGKRKLWLI AQQHPGEHMA EWFMEGVIDR LQANDAVVKQ LLAKADLYLI PNMNPDGAFL GHLRTNFKGK DLNRAWQDAS IELSPEVFFA QAQMKQYGVD AFIDVHGDEE IPHVFTAACE GNPGYTPRLE KLEAQFRNTL CSVTRDFQTV HGYTRNEPGQ ANTTLACNAV GMAHDCLSLT LEMPFKDHDD APDAVTGWSG ARSKALAGAV LETLAKMVGD LR
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