Gene PputGB1_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1963 
Symbol 
ID5869753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2208054 
End bp2209025 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content61% 
IMG OID641547090 
Productspore coat U domain-containing protein 
Protein accessionYP_001668202 
Protein GI167032971 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0837976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCT GGGTGCGTGG TCTGTGGGCG AGCGTGCTGC TGTTGCCGAC GGGTACGGCC 
TGGGCGGTTT GTTCGTCGGT AGCCACGTTG CCGGCGGCGT TTGGCAGCCT CAATTCAACG
CAGGTTCGCA CCACGGTACA GACGGCTTCC ACCCTTAACT CCGGTTTGCA GTGCACCGGC
TCGCTACTCA CCTTGCTCAG CAGCAATGAT CATTTCTACG CAACCATCAC GCCCGCCTCG
GGCGGGCTGG TCGGTCCGAC AGGCGATGTC ATCTCTTACA CACTGTATGC CGACAACAGC
ACCAACTACC CGATCACCCG CGGTCTGGCC TACGACTTCG CTCGCAACGG TATCATCGAC
CTGCTAGGGC TGCTCGGCGG CACCACGCCC AAAGCGGTGC CTATCTACAT GCGTACCCAG
ATTGGCAGCA ATGTCGCGGC AGGGGTGTAC CAAGAGAACC TGACCGTGGC CTGGAGCTGG
AACTATTGTT CGGGGATTGG CGCGTTAGGG ATATGCCTTG GGCGTGACAT CGGTTCAGGT
AGCCAGACCT TGAACGTGAG CCTGACGGTG ACCAACGACT GCCAGATCAC CACCCCCAAC
ATCAGCTTCG CCAGTGCGCC GGTGGTGGCA GGGTTCGGCA CCGTGAGCCA GGGTATAAAC
GTGTCGTGCA CCAAGGGCAG CAGCTACACG GTGGGGCTGG ATGACGGGCA GAACGTGTCC
GCTGGGCGGC GGCGGATGAA GTCGGCGGCC AACAACTACC TGGCCTATGA CATTTTCAAA
AGTGCTGGGA CGGTGCGCTG GGGCGCGACC GGGGCTGCCA GGCGCTCCAG CACCGATGCC
GACGTCAACC CCGGTGTGGG GACTGGTACG GGTAGCCAGG TGTTCAACTA CAACGCCAAG
GTCTATACCG ACCAGGCGAC ACCGCCTGCA GCGACCTATA CCGACAGTGT GATACTGGAT
GTGCAGTTCT GA
 
Protein sequence
MNAWVRGLWA SVLLLPTGTA WAVCSSVATL PAAFGSLNST QVRTTVQTAS TLNSGLQCTG 
SLLTLLSSND HFYATITPAS GGLVGPTGDV ISYTLYADNS TNYPITRGLA YDFARNGIID
LLGLLGGTTP KAVPIYMRTQ IGSNVAAGVY QENLTVAWSW NYCSGIGALG ICLGRDIGSG
SQTLNVSLTV TNDCQITTPN ISFASAPVVA GFGTVSQGIN VSCTKGSSYT VGLDDGQNVS
AGRRRMKSAA NNYLAYDIFK SAGTVRWGAT GAARRSSTDA DVNPGVGTGT GSQVFNYNAK
VYTDQATPPA ATYTDSVILD VQF