Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1963 |
Symbol | |
ID | 5869753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2208054 |
End bp | 2209025 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641547090 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001668202 |
Protein GI | 167032971 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0837976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCT GGGTGCGTGG TCTGTGGGCG AGCGTGCTGC TGTTGCCGAC GGGTACGGCC TGGGCGGTTT GTTCGTCGGT AGCCACGTTG CCGGCGGCGT TTGGCAGCCT CAATTCAACG CAGGTTCGCA CCACGGTACA GACGGCTTCC ACCCTTAACT CCGGTTTGCA GTGCACCGGC TCGCTACTCA CCTTGCTCAG CAGCAATGAT CATTTCTACG CAACCATCAC GCCCGCCTCG GGCGGGCTGG TCGGTCCGAC AGGCGATGTC ATCTCTTACA CACTGTATGC CGACAACAGC ACCAACTACC CGATCACCCG CGGTCTGGCC TACGACTTCG CTCGCAACGG TATCATCGAC CTGCTAGGGC TGCTCGGCGG CACCACGCCC AAAGCGGTGC CTATCTACAT GCGTACCCAG ATTGGCAGCA ATGTCGCGGC AGGGGTGTAC CAAGAGAACC TGACCGTGGC CTGGAGCTGG AACTATTGTT CGGGGATTGG CGCGTTAGGG ATATGCCTTG GGCGTGACAT CGGTTCAGGT AGCCAGACCT TGAACGTGAG CCTGACGGTG ACCAACGACT GCCAGATCAC CACCCCCAAC ATCAGCTTCG CCAGTGCGCC GGTGGTGGCA GGGTTCGGCA CCGTGAGCCA GGGTATAAAC GTGTCGTGCA CCAAGGGCAG CAGCTACACG GTGGGGCTGG ATGACGGGCA GAACGTGTCC GCTGGGCGGC GGCGGATGAA GTCGGCGGCC AACAACTACC TGGCCTATGA CATTTTCAAA AGTGCTGGGA CGGTGCGCTG GGGCGCGACC GGGGCTGCCA GGCGCTCCAG CACCGATGCC GACGTCAACC CCGGTGTGGG GACTGGTACG GGTAGCCAGG TGTTCAACTA CAACGCCAAG GTCTATACCG ACCAGGCGAC ACCGCCTGCA GCGACCTATA CCGACAGTGT GATACTGGAT GTGCAGTTCT GA
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Protein sequence | MNAWVRGLWA SVLLLPTGTA WAVCSSVATL PAAFGSLNST QVRTTVQTAS TLNSGLQCTG SLLTLLSSND HFYATITPAS GGLVGPTGDV ISYTLYADNS TNYPITRGLA YDFARNGIID LLGLLGGTTP KAVPIYMRTQ IGSNVAAGVY QENLTVAWSW NYCSGIGALG ICLGRDIGSG SQTLNVSLTV TNDCQITTPN ISFASAPVVA GFGTVSQGIN VSCTKGSSYT VGLDDGQNVS AGRRRMKSAA NNYLAYDIFK SAGTVRWGAT GAARRSSTDA DVNPGVGTGT GSQVFNYNAK VYTDQATPPA ATYTDSVILD VQF
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