Gene PputGB1_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1955 
Symbol 
ID5869745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2199690 
End bp2200151 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID641547082 
Productresponse regulator receiver protein 
Protein accessionYP_001668194 
Protein GI167032963 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.205931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0730175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC CCATCCTGCT GGTCGAAGAC AACCCCCGGG ACCTGGAACT GACCCTGCTG 
GCCCTGGAGC GCAGCCAATT GGCCAACGAG GTCATCGTGC TGCGCGACGG TGCCGACGCG
CTCGACTACC TGCTGCGCCG CAACGCCTAT GCCGAGCGCG ATGACGGCAA CCCTGCCGTG
CTGTTACTGG ACCTGAAACT GCCCAAGGTC GATGGCCTGG AAGTGCTCAA GGCTGTGCGC
GCCACCGCCG AACTGCGCAG CATACCCACC GTGATGTTGA CCTCCTCGCG CGAAGAACCC
GACCTGCTGC GCGCCTATGA GCTGGGGGTG AACGCGTATG TGGTCAAGCC AGTGGAATTC
AAGGAATTCG TCGCCGCCAT CTCGGACCTC GGGGTATTCT GGGCCGTGCT CAACGAACCA
CCACCCGGCT CACTGCGGCT AAACCGTCGC GGTAGTAACT GA
 
Protein sequence
MLKPILLVED NPRDLELTLL ALERSQLANE VIVLRDGADA LDYLLRRNAY AERDDGNPAV 
LLLDLKLPKV DGLEVLKAVR ATAELRSIPT VMLTSSREEP DLLRAYELGV NAYVVKPVEF
KEFVAAISDL GVFWAVLNEP PPGSLRLNRR GSN