| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1942 |
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| Symbol | |
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| ID | 5869731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2185719 |
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| End bp | 2186075 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547068 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001668181 |
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| Protein GI | 167032950 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00573384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGAAATCT TCAAGGAATT CACATTCGAA TCGGCCCACC GCCTGCCCCA CGTCCCTGAA
GGGCACAAAT GCGGCCGCCT GCATGGTCAC TCGTTCAAGG TCGGCCTGCA CCTGACCGGC
CCGCTCGACC CGCACACTGG CTGGATCCGC GACTTCGCCG AGGTCAAGGC GATCTTCAAG
CCGATCTACG AGCAGCTGGA CCACAACTAC CTGAACGACA TCCCTGGCCT GGAAAACCCT
ACCAGCGAAG TAATCGCCAA GTGGATCTGG GACCAGGTCA AGCCGTTGAT GCCAGAGCTG
TCGAAGGTAC GCATCCACGA AACCTGCACC AGCGGTTGCG AGTATACCGG CGACTGA
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| Protein sequence | MEIFKEFTFE SAHRLPHVPE GHKCGRLHGH SFKVGLHLTG PLDPHTGWIR DFAEVKAIFK
PIYEQLDHNY LNDIPGLENP TSEVIAKWIW DQVKPLMPEL SKVRIHETCT SGCEYTGD
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