Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1920 |
Symbol | |
ID | 5869709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2160743 |
End bp | 2161342 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547046 |
Product | arylesterase |
Protein accession | YP_001668159 |
Protein GI | 167032928 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000320229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000011785 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTGGTGGT TGAGTGCCGG TCTGGCCCTG TATTGCCTGG CCCAGAGCGC GGCGGCGGGA ACGCTGCTGA TTGTTGGCGA TAGTATCAGC GCCGGTTTTG GCCTGGATAC CCGCCAGGGT TGGGTGTCTC TCTTGCAGAC CCGCCTCAAG GACGAAGGTT TCGATGACAA AGTGGTCAAT GCATCGATCA GCGGCGACAC CAGCGCAGGC GGCCAGGCAC GGCTGCCGGC GCTGCTTGCA GCCCATAAAC CCAGCCTGGT GGTGTTGGAG CTGGGCGGTA ACGATGGCCT GCGCGGGCAG CCGCCCGCGC AATTGCAACA AAATCTTGCG TCGATGATCG AGCGTTCGCG CCAGGCTGGT GCCAAGGTAC TTTTGTTGGG CATGCGCCTA CCGCCCAATT ATGGTGTGCG CTACACCACC GCATTTGCCA ACGTGTATGA ACAGCTGGCA GCGGACAAGC AGGTGCCCTT GGTGCCGTTT TTCCTTGAAG GGGTAGGGGG CGTGCCTGAG CTGATGCAGG CCGACGGCAT CCATCCGGCG CAGGGTGCCC AGCAGCGCCT GCTGGAAAAT GCCTGGCCAG CGATAAAACC CTTGCTGTGA
|
Protein sequence | MWWLSAGLAL YCLAQSAAAG TLLIVGDSIS AGFGLDTRQG WVSLLQTRLK DEGFDDKVVN ASISGDTSAG GQARLPALLA AHKPSLVVLE LGGNDGLRGQ PPAQLQQNLA SMIERSRQAG AKVLLLGMRL PPNYGVRYTT AFANVYEQLA ADKQVPLVPF FLEGVGGVPE LMQADGIHPA QGAQQRLLEN AWPAIKPLL
|
| |