Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1915 |
Symbol | |
ID | 5869704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2156036 |
End bp | 2156473 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547041 |
Product | DoxX family protein |
Protein accession | YP_001668154 |
Protein GI | 167032923 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0302074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000182197 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAACA CTACCCTCAA CGCCCTGTTC TCTACCCGTG CTGGCGCTGG CCTCAGCGTT ATCCGCATCC TGGTCGGCAT CATTTTCATG GCGCATGGTG CGCAAAAACT CTTCGGCCTG TTCGGTGGCT ATGGCCTGGA AGGCACCGGC CAATGGATGG AAAGCATCGG CCTGGCCCCG GGTTACCTGA TGGCCCTGCT GTCCGGTAGT GCCGAGTTCT TCGGCGGCCT GGCTCTGGTG GTTGGCCTGC TGGCTCGTCC AGCGGCGCTG GCGCTGACCG TGACCTTGGT GGTGGCGATC TTCTCGGTGC ACATCGGCAA TGGCCTGTTC ATGTCCAACA ACGGCTATGA GTTCGCCTTG GCGCTGCTGG CCGGTACCGT TGCCGTCATG ATCGAAGGCG CAGGCCGCTT CTCGCTCGAC CGCCTGATCG CCCGCTGA
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Protein sequence | MNNTTLNALF STRAGAGLSV IRILVGIIFM AHGAQKLFGL FGGYGLEGTG QWMESIGLAP GYLMALLSGS AEFFGGLALV VGLLARPAAL ALTVTLVVAI FSVHIGNGLF MSNNGYEFAL ALLAGTVAVM IEGAGRFSLD RLIAR
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