| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1904 |
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| Symbol | |
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| ID | 5869693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2143387 |
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| End bp | 2145783 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547030 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001668143 |
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| Protein GI | 167032912 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.798335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000618765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACCA CCCTCGACTT GCCTCTTTTG CCATTGCGCG ATGTCGTTGT TTACCCGCAC
ATGGTTATCC CGCTGTTCGT GGGGCGTGAA AAGTCCATCG AAGCCCTCGA GGCAGCGATG
ACGGGCGAAA AGCAGATCCT CCTGCTGGCC CAGAAGAATC CAGCCGACGA CGACCCGGGT
GAGGACGCCC TGTACCGCGT CGGTACCGTT GCCACCGTGC TGCAACTGCT GAAGCTGCCT
GATGGCACCG TGAAGGTGTT GGTCGAAGGC GAGCAGCGTG GCGCCGTCGA GCGTTTCACC
GAAGTAGAAG GGCACATCCG TGCCGAAGTC TCCCTGATCG ACGAAACCGA TGCCGCCGAG
CGCGAGTCGG AAGTGTTCGT GCGCACGCTG CTGTCGCAGT TCGAGCAGTA CGTTCAGTTG
GGCAAGAAAG TCCCTGCCGA AGTGCTGTCT TCGCTGAACA GCATCGAAGA GCCTGGGCGC
CTGGTCGACA CCATGGCCGC GCACATGGCC CTGAAGATCG AGCAGAAGCA GGAAATTCTC
GAAATCGTCG ACCTGACTAC CCGTGTCGAA CACGTGCTTG CGCTGTTGGA CGCCGAAATC
GACCTGCTGC AGGTCGAAAA GCGCATTCGC GGCCGGGTCA AGAAGCAGAT GGAGCGCAGC
CAGCGCGAGT ACTACCTGAA TGAGCAGATG AAGGCCATTC AGAAAGAGCT GGGCGATGGC
GACGAAGGCC ACAACGAAGT CGAAGAGCTG AAAAAGCGTA TCGAAGCCGC TGGCCTGCCC
AAAGATGCCC TGGCCAAGGC CCAGGCAGAG TTGAACAAGC TCAAGCAGAT GTCGCCGATG
TCGGCCGAGG CCACCGTGGT ACGTTCGTAC CTCGACTGGC TGGTGCAGGT GCCGTGGAAG
GCGCAGAGCA AGGTGCGCCT GGACCTGACC AAGGCCGAGG AAATCCTCGA CGCCGACCAT
TATGGTCTGG AAGAGGTCAA GGAACGTATC CTCGAGTACC TTGCCGTACA GAAACGCGTC
AAGAAAATCC GCGGCCCGGT GCTGTGCCTG GTCGGCCCAC CCGGCGTCGG CAAGACCTCG
TTGGCCGAGT CGATCGCTGC CGCCACCAAC CGCAAGTTCG TGCGTATGGC CCTGGGTGGT
GTGCGTGACG AGGCCGAAAT TCGCGGCCAC CGCCGTACCT ACATCGGCTC CATGCCGGGC
CGTCTGATCC AGAAGATGAC CAAGGTGGGG GTGCGCAACC CGCTGTTCCT GCTCGATGAA
ATCGACAAGA TGGGCAGCGA CATGCGCGGC GACCCGGCCT CGGCGCTGCT TGAAGTGCTC
GACCCGGAGC AGAACCACAA CTTCAACGAC CACTACCTGG AGGTCGACTA CGACCTTTCG
GACGTGATGT TCCTGTGCAC CTCGAACTCG ATGAACATCC CGCCGGCGCT GCTCGACCGG
ATGGAAGTCA TCCGCCTGCC GGGTTACACC GAGGACGAGA AGATCAACAT CGCGGTCAAG
TACCTGGTGC CCAAGCAGGT CAAGGCCAAC GGCTTGAAGA AGGAAGAGCT GGAAGTCGAC
GTCTCGGCGA TCCGCGACAT CATCCGCTAC TACACCCGCG AAGCCGGTGT GCGGGGCCTC
GAGCGGCAAA TCGCCAAGGT CTGCCGCAAG GTGGTCAAGG AACATACCGG GCAGAAGCAG
GTCAAGGTCA AGGTGGCCAG CGAGCAGCTG GAGCACCTGC TGGGCGTGCG CAAGTTCCGC
TACGGCCTGG CCGAGCAGCA GGACCAGATC GGCCAGGTGA CCGGCCTGGC CTGGACTCAG
GTTGGCGGCG AACTGCTGAC CATCGAGGCC GTGGTCATCC CCGGCAAAGG CCAACTGATC
AAGACCGGCT CGCTGGGCGA TGTCATGGTC GAGTCGATCA CCGCCGCGCA GACCGTGGTT
CGCAGCCGCG CCCGCAGCCT GGGGATTGCA GCCGACTTCC ACGAGAAGCA CGACGTGCAC
ATCCACATGC CTGAAGGCGC CACGCCGAAG GACGGCCCAA GTGCCGGTAT CGGCATGTGC
ACCGCGCTGG TGTCGGCGCT GACGCAGATT CCGGTACGTG CCGACGTGGC CATGACCGGC
GAAATCACCC TGCGTGGCCA GGTGTTGGCC ATTGGCGGGC TGAAGGAAAA ACTGCTGGCG
GCACACCGTG GCGGGATCAA GACGGTGATC ATTCCAGAGG AAAATGTGCG CGATCTGAAG
GAGATTCCGG AAAATATCAA ACAGGATCTT CAGATCAAAC CGGTCAAATG GATTGACGAA
GTCCTGCAAA TTGCGCTGCA ATACGCCCCG GAGCCCTTGC CAGATGTGGC TCCTGAGATT
GTCGCGAAAG ATGAAAAGCG CGACGGCGAT GCTAAGGAAA GAATCAGCAC GCATTAG
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| Protein sequence | MKTTLDLPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGEKQILLLA QKNPADDDPG
EDALYRVGTV ATVLQLLKLP DGTVKVLVEG EQRGAVERFT EVEGHIRAEV SLIDETDAAE
RESEVFVRTL LSQFEQYVQL GKKVPAEVLS SLNSIEEPGR LVDTMAAHMA LKIEQKQEIL
EIVDLTTRVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDG
DEGHNEVEEL KKRIEAAGLP KDALAKAQAE LNKLKQMSPM SAEATVVRSY LDWLVQVPWK
AQSKVRLDLT KAEEILDADH YGLEEVKERI LEYLAVQKRV KKIRGPVLCL VGPPGVGKTS
LAESIAAATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE
IDKMGSDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTSNS MNIPPALLDR
MEVIRLPGYT EDEKINIAVK YLVPKQVKAN GLKKEELEVD VSAIRDIIRY YTREAGVRGL
ERQIAKVCRK VVKEHTGQKQ VKVKVASEQL EHLLGVRKFR YGLAEQQDQI GQVTGLAWTQ
VGGELLTIEA VVIPGKGQLI KTGSLGDVMV ESITAAQTVV RSRARSLGIA ADFHEKHDVH
IHMPEGATPK DGPSAGIGMC TALVSALTQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA
AHRGGIKTVI IPEENVRDLK EIPENIKQDL QIKPVKWIDE VLQIALQYAP EPLPDVAPEI
VAKDEKRDGD AKERISTH
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