| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1903 |
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| Symbol | clpX |
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| ID | 5869692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2141939 |
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| End bp | 2143222 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547029 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001668142 |
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| Protein GI | 167032911 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.655928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000724393 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGACA CCCGTAACGG CGAGGACAGC GGCAAATTGC TCTATTGCTC CTTCTGCGGC
AAAAGCCAGC ACGAAGTGCG CAAATTGATT GCCGGGCCCT CGGTATTTAT CTGCGACGAG
TGCGTCGACC TGTGCAATGA CATCATCCGT GAGGAGGTGC AGGAAGCCCA GGCCGAAAGC
AGCGCGCACA AATTGCCTTC GCCGAAAGAA ATCAGCGGCA TCCTGGACCA GTACGTCATT
GGTCAGGAGC GCGCGAAGAA GGTGCTGGCC GTAGCGGTGT ACAACCACTA CAAGCGCCTG
AACCAGCGTG ACAAGAAGGG TGACGAAGTC GAACTGGGCA AGAGCAACAT CCTGCTCATT
GGGCCGACTG GCTCGGGCAA GACCCTGCTC GCCGAAACCC TGGCACGCCT GTTGAACGTA
CCGTTCACCA TTGCTGACGC CACCACCCTG ACCGAGGCCG GTTATGTGGG TGAGGACGTC
GAGAACATCA TCCAGAAGCT GTTGCAGAAG TGCGACTACG ACGTGGAAAA GGCCCAGATG
GGCATTGTCT ACATCGACGA AATCGACAAG ATCTCGCGTA AGTCGGACAA CCCATCCATC
ACCCGTGATG TTTCGGGCGA GGGTGTGCAG CAGGCGTTGC TGAAATTGAT CGAGGGCACC
GTGGCCTCGG TTCCGCCGCA AGGTGGCCGC AAACACCCGC AACAGGAATT CCTGCAGGTT
GATACCCGCA ACATCCTGTT CATTTGCGGT GGTGCGTTCT CGGGCCTGGA AAAGGTCATC
CAGAACCGTT CCACCAAGGG TGGCATCGGT TTTGGCGCCG AAGTGCGTAG CAAGGAAGAG
GGCAAGAAGG TTGGCGAATC CCTGCGTGAG GTCGAGCCGG ACGATCTGGT CAAGTTTGGC
CTGATCCCGG AGTTTGTCGG CCGTCTGCCG GTATTGGCTA CACTCGACGA GCTGGACGAG
GCTGCGTTGA TGCAGATCCT CACCGAGCCG AAGAACGCCC TGACCAAGCA GTATGCCAAG
TTGTTCGAGA TGGAAAGCGT CGACCTCGAG TTCCGCAGTG ATGCGCTCAA GGCCGTAGCG
CGCAAAGCCC TGGAGCGTAA AACCGGCGCC CGTGGCCTGC GTTCGATCCT CGAAGGCGTG
CTGCTCGACA CCATGTACGA GATTCCTTCG AAGAAGGAGG TCAGCAAGGT GGTGATTGAC
GAGAGCGTCA TCGAGGGCAC CTCGCAGCCG CTGATGATCT ACGAGAACAG CGAGCCGCAA
GCCAAGGCCG CGCCAGACGC CTGA
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| Protein sequence | MTDTRNGEDS GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES
SAHKLPSPKE ISGILDQYVI GQERAKKVLA VAVYNHYKRL NQRDKKGDEV ELGKSNILLI
GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQM
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTRNILFICG GAFSGLEKVI QNRSTKGGIG FGAEVRSKEE GKKVGESLRE VEPDDLVKFG
LIPEFVGRLP VLATLDELDE AALMQILTEP KNALTKQYAK LFEMESVDLE FRSDALKAVA
RKALERKTGA RGLRSILEGV LLDTMYEIPS KKEVSKVVID ESVIEGTSQP LMIYENSEPQ
AKAAPDA
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