| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1830 |
|---|
| Symbol | |
|---|
| ID | 5869610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2052597 |
|---|
| End bp | 2053661 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546947 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668069 |
|---|
| Protein GI | 167032838 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA CCGCGCTACA GAACAAAGCC CTGGCCGTAC TCCTGGCGCT GGTGACCATC
GCCTTCTTCT GGATCCTGCT GCCGTACTAC GGCGCCATCT TCTGGGCGGT GATCCTTGGC
ATCCTGTTCG CCCCGCTGCA GCGCCACCTG CTGATACGTT TCGGACGGCG GCGCAACCTG
GCCGCCGCCG CGACCACACT GGTGTGCCTG CTGGTGGCGA TCCTGCCGGT GATCATCACC
AGTGCGCTGC TGGTACAAGA GGGCGCCACG CTGTACCAGC GCATCGAAAG CGGGCAACTG
GACATCGCCG GATACGTCGA GCACGGCAAG GACATGCTCC CGGCATTCGC CCAGCATGGC
CTGGACAACA TGGGCATGGG CAACCTCGAC GGGTTGCGCG ACAAGATCAC CAAGTGGGCA
ACCCAGGGTA GCCAGGCACT GGCTAGCCAG GCGTTCAGTT TTGGCCAGGG CACATTCGAG
TTCGTGATCA GTTTTGGCAT CATGATGTAC CTGCTGTTCT TCTTCCTGCG TGAAGGGCCC
GAGGTGGCCC GTCGGGTGCG GCTGGCCGTG CCACTGCCTG AGCACCAGAA GCGCCGTTTG
CAGCTGAAGT TCAACCGTGT GGTGCGGGCG ACCGTGAAAG GCAACGTGCT GGTGGCCATT
ACCCAGGGCG CGCTGGGCGG TTTAATCTTC TGGGTGCTGG ATATTCCGAG TGCATTGGTG
TGGGCGGTGC TGATGGCGTT CTTGTCGCTG CTGCCGGCGG TAGGCGCTGG GATCGTCTGG
GCGCCGGTGG CCGCGTATTT CCTGCTGACT GGGGCGATAC TGCCTGGGGT GATCCTGACC
GCGTTCGGTG TGCTGGTGAT CGGCCTGGTG GACAACCTGC TGCGGCCGAT CCTGGTGGGC
AAGGACACAC GCATGCCAGA CTATCTGATC CTGGTGTCGA CCCTGGGCGG GCTGGCGGTG
TTCGGCCTCA ACGGCTTCGT GATCGGGCCA TTGATCGCGG CGCTGTTCAT GTCCAGCTGG
GGGATCTTCG CGGCAACCAA ACCCCAGGTG CAATTACCCC AGTAG
|
|---|
| Protein sequence | MNETALQNKA LAVLLALVTI AFFWILLPYY GAIFWAVILG ILFAPLQRHL LIRFGRRRNL
AAAATTLVCL LVAILPVIIT SALLVQEGAT LYQRIESGQL DIAGYVEHGK DMLPAFAQHG
LDNMGMGNLD GLRDKITKWA TQGSQALASQ AFSFGQGTFE FVISFGIMMY LLFFFLREGP
EVARRVRLAV PLPEHQKRRL QLKFNRVVRA TVKGNVLVAI TQGALGGLIF WVLDIPSALV
WAVLMAFLSL LPAVGAGIVW APVAAYFLLT GAILPGVILT AFGVLVIGLV DNLLRPILVG
KDTRMPDYLI LVSTLGGLAV FGLNGFVIGP LIAALFMSSW GIFAATKPQV QLPQ
|
|---|
| |