Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1825 |
Symbol | |
ID | 5869605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2047602 |
End bp | 2048039 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546942 |
Product | hypothetical protein |
Protein accession | YP_001668064 |
Protein GI | 167032833 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.272987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGCC TGTGGGCGCT GTTCCTCAGC GCCTTTGGCG CCGCCACCCT GCTACCGCTG CAATCGGAGG CCGTACTGGT CGGCCTGTTG CTGCGCCAGC CCGAGGCCTG GGCGACGCTG CTGCTGGTCG CCACCCTGGG CAATGTGTTG GGTTCGGTAG TCAACTGGCT GCTGGGGCGG GCCATTGAGC ACCTGCGTGA CAAGCGTTGG TTCCCGTTCA GTGCTACCCA GTTGGAGCGT GCGCAGCAGC GCTACCAGCG CTGGGGGCAA TGGTCATTGC TGCTCAGCTG GATGCCGGTG ATCGGCGACC CGCTGACGCT GATCGCCGGG ATCATGCGTG AGCCGTTCTG GCGCTTTTTG TTGCTGGTGA CCCTGGCCAA GGCCGGCCGC TATGCGGTGC TGGCCATGAT TACCCTGGGC TGGTTTCACG GCTGGTAA
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Protein sequence | MLSLWALFLS AFGAATLLPL QSEAVLVGLL LRQPEAWATL LLVATLGNVL GSVVNWLLGR AIEHLRDKRW FPFSATQLER AQQRYQRWGQ WSLLLSWMPV IGDPLTLIAG IMREPFWRFL LLVTLAKAGR YAVLAMITLG WFHGW
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