Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1815 |
Symbol | |
ID | 5869595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2036149 |
End bp | 2036631 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546932 |
Product | water stress/hypersensitive response domain-containing protein |
Protein accession | YP_001668054 |
Protein GI | 167032823 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0854923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCC GCCTGCACCA CTGTATCCGC CTGTTTCTCG TCCTGCTGAT GGCGTATGGC CTAGGTGCCT GCGCCCTGTT CCAGCCACGC GACCCGGTCA ACATCAGCGT GATCGGCATC GAGCCACTGC CCGGCCAGGA GCTGGAGCTG CGCATGGCGG TGAAAATGCG GGTACAGAAC CCCAACGAGG CGCCGATCGA TTACAACGGT GTCGCCATCA ACCTGGAAGT CAACGGCCAG CCGCTAGCGG CCGGGGTCAG CGACCAGCAG GGCCATATTG GCCGATATGA CGAAGCGGTA ATCGTGGTGC CCGTCAGCAT CACGGCGTTT TCCTTCCTGC GCCAGGCCTA TGGGCTGGGC AAGGTAGAGT CGCTGCAGGG TTTGCCCTAC ACGCTGCGCG GCAAGCTGGC CGGCGGGCCG CTGGGCACCG TGCGCTTTAC CGACGAGGGC AAGCTGGACC TGCCCAAGGG CGCTTACTGG TAA
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Protein sequence | MTARLHHCIR LFLVLLMAYG LGACALFQPR DPVNISVIGI EPLPGQELEL RMAVKMRVQN PNEAPIDYNG VAINLEVNGQ PLAAGVSDQQ GHIGRYDEAV IVVPVSITAF SFLRQAYGLG KVESLQGLPY TLRGKLAGGP LGTVRFTDEG KLDLPKGAYW
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