| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1809 |
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| Symbol | |
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| ID | 5869589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2030519 |
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| End bp | 2033401 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546926 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001668048 |
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| Protein GI | 167032817 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.550904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATT TCTTCGACCC CGCTTCTGAT AAAAACAGCG ACCTCGGCAC CCCGGCCCGT
GACAGCGACG TGCAGGTCAG CCTGAGCATC GACGGCCGCG CCATCAGTGT GCCCGCCGGC
ACCTCGGTGA TGCGCGCCGC CGCGATGCTC GGCACCAGCA TCCCCAAACT GTGCGCCACC
GACAGCCTTG AAGCCTTCGG CTCGTGCCGC ATGTGCATGG TGGAAATCGA AGGCATGCGC
GGCTACCCGG CGTCCTGCAC CACGCCGGTC AGCGAAGGCA TGGTGGTACG TACCGAAACC
CCGCGCCTGG CCGGCCTGCG CCGCAACGTG ATGGAGCTGT ACATTTCCGA CCACCCGCTG
GACTGTCTGA CCTGCTCGGC CAACGGTAAC TGCGAGCTGC AGACCGTGGC TGGCCAGGTG
GGCCTGCGCG AGGTGCGCTA TGGCTATGAC GGCGCCAACC ACCTGGCCGA GAAAAAGGAC
GTTTCCAACC CGTATTTCGA CTACGAGCCG AGCAAGTGCA TCGTTTGCAG CCGCTGCGTG
CGCGCCTGCG AGGATATCCA GGGCACCTTT GCCCTGACCA TTACCGGGCG TGGTTTTGAA
TCGCGGGTAG CGGCAGCGGG TGGTGATGAC TTCCTCACTT CCGAGTGCGT GTCGTGCGGC
GCCTGCGTGC AGGCCTGCCC GACTGCGACC CTGACGGAAA AGAGCCTGGT GCAACTTGGC
CAGCCTGAGC GTTCGGTCAT TACCACGTGC GCCTACTGCG GCGTTGGCTG TTCGTTCCGC
GCCGAAATGA AGGGCGACCA GCTGGTGCGC ATGGTCCCGG ACAAGAACGG CGGCGCCAAC
CATGGCCACG CCTGCGTCAA AGGCCGCTTC GCCTGGGGTT ATGCCACCCA CCCGGACCGC
ATTACCAAGC CGATGATTCG CAAGCGCCTG GAAGACCCGT GGCAGGAAGT GAGCTGGGAC
GAGGCGGTGA CCTATGCCGC CAGCGAGTTC CGCCGCATCC AGCTCAAGTA CGGGCGCGAC
GCCATTGGCG GCATCACCTC CAGCCGCTGC ACCAACGAAG AAGCCTACCT GGTGCAGAAA
TTGGTGCGCA CGGCATTCGG CAACAACAAC GTCGATACCT GCGCGCGGGT GTGCCATTCG
CCCACTGGCT ATGGCCTGAA GCAGACCCTG GGTGAATCGG CGGGCACGCA AAGCTTCGAT
TCGGTGATGC AGGCCGACGT GGTGCTGGTG ATCGGCGCCA ACCCCACCGA TGCTCACCCG
GTGTTTGGTT CGCAACTCAA GCGTCGCTTA CGCCAGGGGG CTCGGCTGAT CGTGATCGAC
CCACGGCGTA TCGACCTGGT CGACTCGCCG CACGCCCGTG CCGAGCTGCA TCTGCAACTG
CGCCCAGGCA CCAACGTGGC CATGCTCAAC GCCCTGGCCC ACGTGATAGT CACCGAGGGC
CTGCTGGCTC AACGCTTCAT CGATGCCCGC TGCGAAACCG AAGACTTCGC CCGCTGGCGC
GACTTCGTCA GCCTGGCAGA CAACGCCCCC GAGGTGCTCG GCCCGGTCTG TGGTGTGCCT
GCCGAGCAGA TCCGCGCCGC TGCGCGGTTG TATGCCACCG GCGGCAACGC AGCCATCTAT
TACGGCTTGG GCGTGACCGA GCACAGCCAG GGTAGTACTG CGGTGATGGG CATCGCCAAC
CTGGCCATGG CCACCGGCAA TATCGGCCGC GAGGGGGTAG GGGTGAACCC GTTGCGCGGG
CAGAACAACG TGCAGGGTTC GTGCGACATG GGTTCGTTCC CCCACGAGCT GCCCGGCTAC
CGGCATATCT CCAACGAGGG CGTGCGCGCC GAGTTCGAAC GAGCCTGGGG CGTGACCCTG
CAGCCCGACC CTGGTCTGCG CATTCCCAAC ATGTTCGAGG CTGCGTTGGA CGGCAGCTTC
AAAGCGTTGT ACTGCCAGGG TGAGGACATC GCCCAGAGCG ACCCTAACAC CCAGCACGTC
ACGGCAGCCT TGCACGCCAT GGAGTGCGTG GTGGTGCAGG ATATTTTCCT CAACGAAACC
GCCAAGTTCG CCCATGTTTT CCTGCCGGGC AGTTCATTCC TGGAAAAGGA CGGCACTTTC
ACCAATGCCG AGCGGCGCAT TTCGCGGGTG CGCAAGGTCA TGGAGCCGCT GGCCGGCAAG
GCCGACTGGG AAGCCACCGT GGCCCTGGCC AACGCCCTGG GCTACCCGAT GAACTACCGC
CACCCGTCCG AGATCATGGA CGAGATCGCT CGCCTGACGC CGACCTTCCG CCGGGTAAGC
TACGCCGAGA TCGACCGCCA TGGCAGCTTG CAATGGCCAT GCAACGATGC TGCACCCGAT
GGCACACCGA CCATGCACAT CGACCAGTTC GTGCGTGGCA AGGGCCGCTT CATGCTTACC
GGCTACGTGC CCACCGACGA AAAGGTCAAC AACCGCTATC CGCTGCTGCT GACCACCGGG
CGCATCCTCA GCCAGTACAA CGTCGGGGCT CAGACCCGAC GTACCGGCAA CGTCGCCTGG
CATGATGCCG ACCGTTTGGA GATCCACCCG ACCGACGCCG AAAGCCGTGG CATTCAGGAC
GGTGACTGGG TGGGAATCGG CAGCCGCGCC GGGCAGACCG TGCTGCGTGC CAAGGTCAGC
GCACGGGTGG CGCCGGGCGT GGTGTACACC ACGTTCCACT TCCCTGAATC GGGGGCGAAC
GTGATCACCA CCGACAACTC CGACTGGGCC ACCAACTGCC CCGAGTACAA GGTGACGGCT
GTGGAAGTGG TGAAAGTGTT CCAGCCATCA CAATGGCAAA AGCGCTACCA GGACTTCAGT
GATGAACAGC GGCGGCTGCT GATAGAGCGC CGCACAGCGG AAAAAGCCGA GGTGCGCCGA
TGA
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| Protein sequence | MINFFDPASD KNSDLGTPAR DSDVQVSLSI DGRAISVPAG TSVMRAAAML GTSIPKLCAT
DSLEAFGSCR MCMVEIEGMR GYPASCTTPV SEGMVVRTET PRLAGLRRNV MELYISDHPL
DCLTCSANGN CELQTVAGQV GLREVRYGYD GANHLAEKKD VSNPYFDYEP SKCIVCSRCV
RACEDIQGTF ALTITGRGFE SRVAAAGGDD FLTSECVSCG ACVQACPTAT LTEKSLVQLG
QPERSVITTC AYCGVGCSFR AEMKGDQLVR MVPDKNGGAN HGHACVKGRF AWGYATHPDR
ITKPMIRKRL EDPWQEVSWD EAVTYAASEF RRIQLKYGRD AIGGITSSRC TNEEAYLVQK
LVRTAFGNNN VDTCARVCHS PTGYGLKQTL GESAGTQSFD SVMQADVVLV IGANPTDAHP
VFGSQLKRRL RQGARLIVID PRRIDLVDSP HARAELHLQL RPGTNVAMLN ALAHVIVTEG
LLAQRFIDAR CETEDFARWR DFVSLADNAP EVLGPVCGVP AEQIRAAARL YATGGNAAIY
YGLGVTEHSQ GSTAVMGIAN LAMATGNIGR EGVGVNPLRG QNNVQGSCDM GSFPHELPGY
RHISNEGVRA EFERAWGVTL QPDPGLRIPN MFEAALDGSF KALYCQGEDI AQSDPNTQHV
TAALHAMECV VVQDIFLNET AKFAHVFLPG SSFLEKDGTF TNAERRISRV RKVMEPLAGK
ADWEATVALA NALGYPMNYR HPSEIMDEIA RLTPTFRRVS YAEIDRHGSL QWPCNDAAPD
GTPTMHIDQF VRGKGRFMLT GYVPTDEKVN NRYPLLLTTG RILSQYNVGA QTRRTGNVAW
HDADRLEIHP TDAESRGIQD GDWVGIGSRA GQTVLRAKVS ARVAPGVVYT TFHFPESGAN
VITTDNSDWA TNCPEYKVTA VEVVKVFQPS QWQKRYQDFS DEQRRLLIER RTAEKAEVRR
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