| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1786 |
|---|
| Symbol | |
|---|
| ID | 5869566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2003927 |
|---|
| End bp | 2004700 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546903 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001668025 |
|---|
| Protein GI | 167032794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTG TGCCCGTTAT TGGCATTACC GCATGCACCA GCATGATTGA GCAGCATGCC
ACCCAGACCA TCGCCGAGAA GTACGCACGC GCGGCCGCCA AAGCGGCGTG TGGGCTGCCC
ATCGTGATCC CCAGCCTCGG TGACCTGATG GACAGCGCCG ATATTCTCGA CGTGGTGGAT
GGGCTGATCT TCACCGGTTC GCCGTCCAAC ATCGAGCCGT TTCACTACAA CGGCCCGGCC
AGTGCGGTAG GCACCCATCA TGACCCTTTG CGTGATGCCA CCACGTTGCC GCTGATGCGT
GCGGCCATCG CCGCCGGTGT GCCCGTACTT GGCATTTGCC GTGGCTTTCA GGAAATGAAC
GTGGCGTTGG GCGGCACCCT GTACCAGAAG GTCCACGAGG CTGGGGTGTT CATGGATCAC
CGCGAAGGCA AGGGCGAGCC CATCGAAAAG CAGTATGGCC CGCGTCACAC CATGCATGTG
GAGCCCGGTG GCCTGCTCGA CCGCATGGGC TTGCCGGCGA TCTTCGACGT CAATTCCATC
CACGGCCAGG GCATTGATGT ACTGGCCCCG GGGCTACGGG TGGAAGCATT GGCACCAGAT
GGCCTGGTGG AAGCGATTTC GGTCGAGAAC AGCAAGGGGT TTGCCCTGGC CGTGCAATGG
CACCCGGAGT TCCAGGTCAT GGACAACCCG CAGTACCTGG CCATCTTCCA GTCATTCGGC
AAGGCCTGCC GGCAGCGCTC GGTGCTGCGC CAGAGGCTGT TGCTGTCCGC CTGA
|
|---|
| Protein sequence | MPRVPVIGIT ACTSMIEQHA TQTIAEKYAR AAAKAACGLP IVIPSLGDLM DSADILDVVD
GLIFTGSPSN IEPFHYNGPA SAVGTHHDPL RDATTLPLMR AAIAAGVPVL GICRGFQEMN
VALGGTLYQK VHEAGVFMDH REGKGEPIEK QYGPRHTMHV EPGGLLDRMG LPAIFDVNSI
HGQGIDVLAP GLRVEALAPD GLVEAISVEN SKGFALAVQW HPEFQVMDNP QYLAIFQSFG
KACRQRSVLR QRLLLSA
|
|---|
| |