Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1779 |
Symbol | |
ID | 5869559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1996824 |
End bp | 1997858 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546896 |
Product | hypothetical protein |
Protein accession | YP_001668018 |
Protein GI | 167032787 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATG TATCGCTCGG ACTGGGTCTG TTACTTGCCG CTGCCTTGGT CGAAGCAGCC CCATTGCAGG TGCCCACCCC GGCCGCACTG AGGAGCCAGC TCGAAAGCCT CAAGCCTGGC CAGTTTCTCT GGTACCCGCA GGTTTCGCCG GTAGGGCCGG TGACCGTGGT GGTGAGCCTT ACCGAGCAAC GTGCCTACGT CTATCGCAAT GGCATTGCCA TTGGCGTCAG TACCGTGAGC AGCGGCAAGC CAGGCCGGGA AACCCCCACC GGGGTATTCA GCATTCTGCA GAAGAAGGTC GAGCACAAAT CCAGCCTCTA CAACAGCGCG CCGATGCCCT ATATGGAGCG CCTGACGTGG GACGGCATTG CCTTGCACGC TGGCCATCTG CCGGGCTACC CCGCTTCGCA TGGTTGTGTC CGGTTGCCGA TGGACTTTGC CAAGAAGCTG TACGAAGTCA CCGGTTTCAG TTCGACGACT GTCATCGTTT CCGATACCAA CAGTGCGCCG GTGGAGGTCT ACCACCCCGG CGTGCTGGCG CCTACGGTCA GCGATGGCAA GGCCCAAGGC CCGCTGGTAT TGAACAACCA ACAGTTCTGG AACGACCCAG ACCCGACGGC TGGGCCACTG TCGATCCTGA TCAGCCGCGC CGACTTGCGG GCCTACGTGT TCCGCGGTGG CCAGTTGATC GGTTCGGCGC CGGCACTTTC GGCTGAAAGC GGCCAGCATC GCAGTGGCAT GGCGGTGTAT TCCCTGTTGC AAAAGCCATC CAGCTTGGCA CTCGATGGCG GGCTACCCTT ACGCTGGTCA GTGGTGGGCT TGAGCAACCC GGAGTATGGG AATACGCCTT ATGAACAATT GGGGCAATTG AACATCAACC CGGAATTTCG CCGTCATCTA CGAGCGGCAA TGGACGTTGG CACGATGCTG GTGATCACTG ACTGGGCGTC TACTCGGGAT ACCCGCAGCA ATGGACAATT CACGGTGATC AGCACCGAGG GCAGTGAAGA ATCTAAACCA TTGGTCAAGA AATGA
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Protein sequence | MSNVSLGLGL LLAAALVEAA PLQVPTPAAL RSQLESLKPG QFLWYPQVSP VGPVTVVVSL TEQRAYVYRN GIAIGVSTVS SGKPGRETPT GVFSILQKKV EHKSSLYNSA PMPYMERLTW DGIALHAGHL PGYPASHGCV RLPMDFAKKL YEVTGFSSTT VIVSDTNSAP VEVYHPGVLA PTVSDGKAQG PLVLNNQQFW NDPDPTAGPL SILISRADLR AYVFRGGQLI GSAPALSAES GQHRSGMAVY SLLQKPSSLA LDGGLPLRWS VVGLSNPEYG NTPYEQLGQL NINPEFRRHL RAAMDVGTML VITDWASTRD TRSNGQFTVI STEGSEESKP LVKK
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