| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1771 |
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| Symbol | |
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| ID | 5869551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1988655 |
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| End bp | 1989893 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641546888 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668010 |
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| Protein GI | 167032779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.156898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCTT CGTCCGACAT GGTTCAAAAA AAGGATGCGT CACCGCGCAA GGCTTTGATA
GCCAGTGTGA CGGGTTATGC AATGGACGGC TTCGACTTAC TGATTCTCGG GTTTATGCTG
CCTGCGATTA CGATCGGCCT TGCGCTGACA TCATCGGAGG CCGGCTCGCT GGTGACTTGG
ACGTTATTGG GAGCTGTGGC AGGCGGGCTG ATATTTGGCC AATTGAGCGA TCGCTATGGC
CGGGTTCGAA TGCTGACCCT GTGCATCCTG ACCTTCTCCA TCTTCACTGG TCTCTGCGCA
ATCGCTCAGG GCTATTGGGA TCTGTTGATC TACAGGACCC TCGCCGGTTT CGGTTTGGGT
GGTGAGTTCG GTATCGGCAT GGCGCTGATC GCCGAGACCT GGCCGGCACA CCGGCGCAAC
CGAGCCTCCT CTTATGTGGG CATGGGATGG CAAGCCGGTG TTCTTGCGGC GGCTCTTCTC
ACACCATTGC TTCTGCCTTA CATCGGCTGG CGTGGCATGT TCCTGGTCGG CTTGCTGCCT
GCTTTCGTTT CTTTGATTGT CCGTCACACG ATGAGTGAGC CGGCTGAGTT CGTGAAGGCT
GCAGCTGATC CTGTTCCGTT TGCTCGGCGA TTCACTGACC TTTTCAAAGA CCGGCAGACC
ACCAAGGCCA GTGTTGGGGT GATGGTCCTG ACTTCTGTGC AGAACTTTGG GTACTACGGC
CTGATGATCT GGATGCCCAG CTACTTGTCC AAGAAATTCG GCTTTTCGCT CATGGCATCT
GGTACTTGGA CTGCAGTCAC TGTGCTGGGC ATGGCATTCG GGATTTGGCT GTTCGGCCAA
CTGGCGGATC GCTTTGGCCG CAAGAAGATG TTCCTGCTCT ACCAAGCAGG CGCAGCGATC
ATGGTCATTG CTTATGCCAA CCTTGATAAC CCGACCGTCA TGCTGTTCGC CGGCGCGATC
ATGGGGATTT TTGTGAACGG TATGATCGGC GGTTATGGGG CGTTGATCTC TGATCTCTAC
CCGGCGCAGA TACGCGCCAC GGCCCAGAAC GTGCTGTTCA ACATTGGCCG TGCTGCGGGC
GGGTTCGGTC CATTAGTTGT GGGGGCGGTA GCACTTCATT ACTCCTTCAC TGCCGCGATC
ATGTTGCTCT CGTCGCTTTA CGTCGTGGCG ATGGCCGCTA CGGTCTTTCT GCTTCCTGCC
TGTCAGAGTG AACAGCTGAA AAAGGCTCAG CCGGCTTAA
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| Protein sequence | MMASSDMVQK KDASPRKALI ASVTGYAMDG FDLLILGFML PAITIGLALT SSEAGSLVTW
TLLGAVAGGL IFGQLSDRYG RVRMLTLCIL TFSIFTGLCA IAQGYWDLLI YRTLAGFGLG
GEFGIGMALI AETWPAHRRN RASSYVGMGW QAGVLAAALL TPLLLPYIGW RGMFLVGLLP
AFVSLIVRHT MSEPAEFVKA AADPVPFARR FTDLFKDRQT TKASVGVMVL TSVQNFGYYG
LMIWMPSYLS KKFGFSLMAS GTWTAVTVLG MAFGIWLFGQ LADRFGRKKM FLLYQAGAAI
MVIAYANLDN PTVMLFAGAI MGIFVNGMIG GYGALISDLY PAQIRATAQN VLFNIGRAAG
GFGPLVVGAV ALHYSFTAAI MLLSSLYVVA MAATVFLLPA CQSEQLKKAQ PA
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