| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1676 |
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| Symbol | fadB |
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| ID | 5869456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1897562 |
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| End bp | 1899709 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546793 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001667915 |
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| Protein GI | 167032684 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.281306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTACG AAGGTAAAGC CATCACGGTT AAGGCTCTTG AAAGTGGCAT CGTCGAGCTC
AAGTTCGACC TCAAGGGTGA GTCCGTCAAC AAGTTCAACC GCCTGACCCT GAACGAGCTG
CGCCAGGCCG TCGAAGCCAT CCAGGCCGAC GCCTCGGTCA AGGGCGTGAT CGTCAGCAGT
GGCAAGGACG TGTTCATCGT CGGCGCCGAC ATCACCGAGT TCGTCGACAA CTTCAAGCTG
CCCGAGGCCG AACTGGTCGC CGGCAACCTG GAAGCCAACC GCATCTTCAA CGCCTTTGAA
GACCTCGAAG TGCCCACCGT TGCCGCCATC AACGGCATCG CCCTGGGCGG CGGCCTGGAA
ATGTGCCTGG CAGCCGACTA CCGGGTCATG TCCAACAGCG CCAAGATCGG CCTGCCAGAA
GTCAAGCTGG GTATCTACCC TGGCTTCGGC GGCACCGTGC GTCTGCCACG CCTTATCGGC
TCGGACAACG CCATCGAGTG GATCGCCGCC GGCAAGGAAA ACCGTGCCGA GGACGCCCTG
AAAGTGGGTG CCGTTGACGC CGTGGTCGCC CCTGAGCTGC TGCTGGCCGG TGCTCTCGAC
CTGATCAAGC GCGCCATCAG TGGCGAGCTG GATTACAAGG CCAAGCGCCA GCCAAAGCTG
GAGAAACTCA AGCTCAACGC CATCGAGCAG ATGATGGCCT TCGAGACCGC CAAGGGCTTT
GTCGCCGGCC AGGCCGGGCC GAACTACCCA GCCCCGGTCG AAGCCATCAA GTCCATTCAG
AAAGCCGCCA ACTTCGGTCG CGACAAAGCG CTGGAAGTCG AAGCCGCAGG CTTTGCCAAG
CTGGCCAAGA CTTCGGTCGC CGAGAGCCTG ATCGGCCTGT TCCTCAACGA CCAGGAGCTC
AAGCGCAAGG CCAAGGCGCA TGACGAAATC GCCCATGACG TGAAGCAGGC CGCCGTGCTC
GGCGCCGGCA TCATGGGTGG CGGCATTGCC TACCAGTCGG CGGTCAAGGG CACCCCGATC
CTGATGAAGG ACATCCGCGA GGAAGCCATC CAGCTGGGCC TGAACGAGGC CTCCAAGCTG
CTCGGCAACC GCGTCGAGAA GGGCCGCCTG ACCCCGGCCA AGATGGCCGA GGCACTCAAC
GCCATTCGCC CGACCCTGTC CTATGGCGAT TTCGCCAATG TCGACATCGT CGTCGAGGCC
GTGGTCGAGA ACCCGAAGGT CAAGCAAGCG GTACTGGCGG AAGTGGAAGG CCAGGTGAAG
GACGATGCGA TCCTCGCCTC CAACACTTCG ACCATTTCCA TCAACCTGCT GGCCAAGGCG
CTCAAGCGCC CGGAAAACTT CGTCGGCATG CACTTCTTCA ACCCGGTGCA CATGATGCCG
CTGGTGGAAG TGATTCGTGG CGAGAAGTCC AGTGAAGTGG CGGTTGCCAC CACCGTGGCC
TACGCCAAGA AAATGGGCAA GAACCCGATC GTGGTCAACG ACTGCCCGGG CTTTTTGGTC
AACCGCGTGC TGTTCCCTTA CTTCGGCGGC TTCGCCAAGC TGGTCAGTGC CGGTGTCGAC
TTCGTGCGCA TCGACAAGGT AATGGAAAAG TTCGGCTGGC CGATGGGCCC GGCCTACCTG
ATGGACGTGG TCGGTATCGA CACCGGCCAC CATGGTCGCG ACGTAATGGC CGAAGGTTTC
CCGGACCGCA TGAAGGACGA GCGCCGCTCG GCCGTCGATG CGCTGTACGA GGCCAACCGC
CTGGGCCAGA AGAATGGTAA AGGCTTCTAC GCCTACGAAA CCGACAAGCG CGGCAAGCCG
AAGAAGGTCT TCGACGCCAC CGTGCTCGAT GTGCTCAAGC CGATCGTGTT CGAGCAGCGT
GAAGTCACCG ACGAAGACAT CATCAACTGG ATGATGGTCC CGCTGTGCCT GGAGACCGTG
CGCTGCCTGG AAGACGGCAT CGTCGAAACC GCTGCCGAAG CCGATATGGG CCTGGTCTAC
GGCATTGGTT TCCCTCCCTT CCGCGGTGGT GCGCTGCGTT ACATCGACTC GATCGGTGTT
GCCGAATTCG TCGCCCTGGC CGATCAGTAT GCCGATCTGG GGCCGCTGTA CCACCCGACC
GCCAAGCTGC GTGAAATGGC CAAGAACGGC CAGCGCTTCT TCAACTGA
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| Protein sequence | MIYEGKAITV KALESGIVEL KFDLKGESVN KFNRLTLNEL RQAVEAIQAD ASVKGVIVSS
GKDVFIVGAD ITEFVDNFKL PEAELVAGNL EANRIFNAFE DLEVPTVAAI NGIALGGGLE
MCLAADYRVM SNSAKIGLPE VKLGIYPGFG GTVRLPRLIG SDNAIEWIAA GKENRAEDAL
KVGAVDAVVA PELLLAGALD LIKRAISGEL DYKAKRQPKL EKLKLNAIEQ MMAFETAKGF
VAGQAGPNYP APVEAIKSIQ KAANFGRDKA LEVEAAGFAK LAKTSVAESL IGLFLNDQEL
KRKAKAHDEI AHDVKQAAVL GAGIMGGGIA YQSAVKGTPI LMKDIREEAI QLGLNEASKL
LGNRVEKGRL TPAKMAEALN AIRPTLSYGD FANVDIVVEA VVENPKVKQA VLAEVEGQVK
DDAILASNTS TISINLLAKA LKRPENFVGM HFFNPVHMMP LVEVIRGEKS SEVAVATTVA
YAKKMGKNPI VVNDCPGFLV NRVLFPYFGG FAKLVSAGVD FVRIDKVMEK FGWPMGPAYL
MDVVGIDTGH HGRDVMAEGF PDRMKDERRS AVDALYEANR LGQKNGKGFY AYETDKRGKP
KKVFDATVLD VLKPIVFEQR EVTDEDIINW MMVPLCLETV RCLEDGIVET AAEADMGLVY
GIGFPPFRGG ALRYIDSIGV AEFVALADQY ADLGPLYHPT AKLREMAKNG QRFFN
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