| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1667 |
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| Symbol | |
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| ID | 5869447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1887256 |
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| End bp | 1887915 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546784 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001667906 |
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| Protein GI | 167032675 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.869411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTA GGCTGCTGCT GGTAGACGAC CACTCATTGA TCCGCGCCGG GGTACGTGCG
CTGGTCTGCG ATATCCCCGG CTATGATGTG ATCGGCGAAG CCGACGATGG CAGCCAGTTG
CTCGAACAGG TTCGCACACT GGCCCCAGAC ATCGTCCTGC TGGACATCTC GATGCGTTCG
ACCAGCGGCC TGGACGCTCT CACCCAGCTG CGGGCCAGCG GCAGCACGTG CAAGGTGCTG
ATCCTGTCGA TGCACACCGA CCCGGACCTG ATCATGCGGG CCCTGGAAAG CGGCGCCCAC
GGCTATCTGC TCAAGGACAC CAGCGCCACC GAGCTGGAAC AGGCCCTGAG CGCCGTGCGC
AACGGCGAGC GTTACCTCAG CCCGGCCATT GCCCACACCG TCATCAACCA GGCGCTGCGC
CACACCAAGC AAGGCAAGCA AAGCGCTGGC GAGCGGCACA ACCTGACGGC ACGGCAACTG
GAGATCCTGC GCCTGATCGT GCGCGGCAAG TCCACCCGGG AAATTGCTAC AGGCCTGGGC
CTGTCGATCA AGACCATTGA AACCCACCGG TCGCAAATCA TGAAGCGCCT GCAAATTCAC
GACGTAGCGG GCCTGGTGCT GTTCGCCGTG CGCGAGAAAA TCATCAGCCT GGACGACTGA
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| Protein sequence | MTCRLLLVDD HSLIRAGVRA LVCDIPGYDV IGEADDGSQL LEQVRTLAPD IVLLDISMRS
TSGLDALTQL RASGSTCKVL ILSMHTDPDL IMRALESGAH GYLLKDTSAT ELEQALSAVR
NGERYLSPAI AHTVINQALR HTKQGKQSAG ERHNLTARQL EILRLIVRGK STREIATGLG
LSIKTIETHR SQIMKRLQIH DVAGLVLFAV REKIISLDD
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