| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1653 |
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| Symbol | |
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| ID | 5869432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1868767 |
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| End bp | 1870332 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546769 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001667892 |
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| Protein GI | 167032661 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.976535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.292811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACA ACCAGCCGAT TACCCAGAGA GAACGGACTT TCCCTGCCCA GCAGCGGTTG
ATCTCCACCA CCAACGCCAA GGGCGTGATC ACCTACTGCA ACGATGCCTT CATCGAAATC
AGCGGTTTCA CCCGCGAAGA GCTGACGGGC GCGCCGCACA ACCTGGTACG CCACCCCGAC
GTGCCGGCTG CAGTGTTTGC CCACATGTGG CAAACCCTCA AGCAGGGCCA GCCATGGATG
GGTATCGTCA AGAACCGCTG CAAGTCTGGC GACCATTACT GGGTCAACGC CTACGTCACA
CCCATCTTCG ATAACAACCA AGTTGTCGGC TTCGAGTCGG TGCGAGTCAA ACCCACCGCC
GAGCAGATCC GTCGCGCCGA AGGCCTGTAC CAGCGCATCA ACCAGGGCAA GCCGGCCGTA
CCTCGCAGGG ACAAGTGGCT GCCAGTGCTG CAGGACTGGC TGCCGTTCAT CCTCATCAGC
CAGGTAGGCT TCCTGATCGG CAACTGGCTG GGCCATTCCT GGGGCTTTGC CCTGGCTGCC
GGGCTATCCG TGCCCTTGGG CCTGCTCGGC CTGAGCTGGC AGCAACGCGG CCTCAAGCGC
CTGTTGCGTC TGGCCGAACA GACCACTTCC GACCCGCTGA TCGCACAGAT GTACACCGAC
AGCCGTGGCG TGCAGGCGCG CCTGGAAATG GCCATGCTCA GCCAGGATGC CCGCATGAAA
ACCTGCCTGA CCCGCCTGCA GGACAGTGCC GAGCACCTCA GCGACCAGGC GCGTCAGTCC
GATGCCCTGG CGCACAAGAG CTCCTCGGGG CTGGAACGCC AGCGAGTGGA GACCGAGCAG
GTTGCCGCTG CGGTAAACCA GATGGCCGCC ACCACTCAGG AAGTGGCCAA CCACGTGCAG
CGTACTGCCG ACGCCACCCA GGAAGCCAAC CGCCTGACCA GCCAGGGCCG GCAGATTGCC
GGGGAAACCC GCGAGGCCAT TGAACGCCTG TCGGCGGCGG TGGGCGAAAC CGGCCAGACG
GTGACGCAAC TGGCCAAGGA CAGCGATGAA ATTGGTGGCG TGGTCGACGT GATCAAGGGT
ATCGCCGACC AGACCAACCT GCTGGCGCTG AATGCGGCCA TCGAAGCGGC GCGTGCCGGT
GAAATGGGCC GCGGCTTTGC CGTGGTAGCC GATGAAGTGC GCCAGCTGGC CCAGCGCACC
GCCGAATCCA CCGGGCAGAT CCACGGCCTG ATCGCCAAGT TGCAACAAAC CGCCAGCAAT
GCCGTGCTGA CCATGGAAAC CGGCCACCGC CAGGCGCAGG AAGGTGTCGA CCGGGTGATG
CAGGCTGACG AAGCATTGGT GGGGATCAGC GAAGCGGTGG CCAACATCAC CGACATGGCC
ACCCAGATTG CCGCAGCGAC CGAGGAGCAG ACCGCAGTGG CTGACGAAAT CAGCCGCAAC
ATCAGCACCA TTGCCGAACT GGCCGACCAG ACCGCCGAGC AGGCGCAGCA CTCGGCACTG
CTGAGCGAGG AACTGACCAG CACGGCAGGG AGCCAGTATT CGTTGGTGGA GCGGTTCAAC
CGCTGA
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| Protein sequence | MRNNQPITQR ERTFPAQQRL ISTTNAKGVI TYCNDAFIEI SGFTREELTG APHNLVRHPD
VPAAVFAHMW QTLKQGQPWM GIVKNRCKSG DHYWVNAYVT PIFDNNQVVG FESVRVKPTA
EQIRRAEGLY QRINQGKPAV PRRDKWLPVL QDWLPFILIS QVGFLIGNWL GHSWGFALAA
GLSVPLGLLG LSWQQRGLKR LLRLAEQTTS DPLIAQMYTD SRGVQARLEM AMLSQDARMK
TCLTRLQDSA EHLSDQARQS DALAHKSSSG LERQRVETEQ VAAAVNQMAA TTQEVANHVQ
RTADATQEAN RLTSQGRQIA GETREAIERL SAAVGETGQT VTQLAKDSDE IGGVVDVIKG
IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTASN
AVLTMETGHR QAQEGVDRVM QADEALVGIS EAVANITDMA TQIAAATEEQ TAVADEISRN
ISTIAELADQ TAEQAQHSAL LSEELTSTAG SQYSLVERFN R
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