| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1650 |
|---|
| Symbol | |
|---|
| ID | 5869429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1866938 |
|---|
| End bp | 1867369 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641546766 |
|---|
| Product | peptidase M15A |
|---|
| Protein accession | YP_001667889 |
|---|
| Protein GI | 167032658 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.309643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.633092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCA CTCCCCATTT CACCTTCGAT GAAATGACCG TTTCCCAGCT CGCCGCCAGG
GACGGATTCG ATAACACCCC ACCCCCTGAA GCCAGGGCCA ACCTGCTGTT GCTGTGCTGT
GCGCTGGAGC AGGTACGTGC ACTGTTCGAC GCGCCCATCA TTGTCAGCAG CGGCTATCGC
AGCGAAAAGG TCAACCGGCT GATCGGCGGT GCCGTGAGCA GCCAGCATGT GCAAGGGCTG
GCGGCGGACT TCACGGTGGT CGAGGTCAGC CCGCGTGAGA CCGTGCGGCG GATCAGCGAA
AGTGGCGTGC CCTTCGATCA ACTCATTCTG GAATTCGACA AGTGGGTGCA TCTGTCAGTG
GCGCGAGACA CGCCGCGTAG ACAGGTGCTG ACCATACGCA AAGGGAGCGG CTACCTGGCG
GGGCTGCAAT GA
|
|---|
| Protein sequence | MLITPHFTFD EMTVSQLAAR DGFDNTPPPE ARANLLLLCC ALEQVRALFD APIIVSSGYR
SEKVNRLIGG AVSSQHVQGL AADFTVVEVS PRETVRRISE SGVPFDQLIL EFDKWVHLSV
ARDTPRRQVL TIRKGSGYLA GLQ
|
|---|
| |