| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1643 |
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| Symbol | |
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| ID | 5869422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1861657 |
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| End bp | 1862274 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641546759 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001667882 |
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| Protein GI | 167032651 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.003137 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACTCCA TATTTATTGT TGACGACCAC CCGGTCATCC GCCTGGCCGT CCGTATGCTG
CTGGAAAACC AGAACTACAA AATTGTCGGC GAGTCGGACA ATGGCGTAGA CGCCATGCAG
ATGATCCGCG AGAGCAACCC CGACCTGGTC ATCCTCGACA TCAGCATTCC CAAGCTAGAC
GGCCTGGAGG TGCTTTCCCG GTTTCAGTCC ATGGCCCTGC CCTTGAAGGT GCTGGTATTG
ACTGCACAAT CCCCGGCATT GTTTGCCGTA CGCTGCATGC ACTCGGGTGC CGCAGGTTAC
GTGTGCAAGC AGGAAGACCT GAGTGAACTG CTCAGTGCTA TCAAAGCCGT ACTGGCCGGT
TATAACTATT TCCCCAGCCA GGCCATTAAG CACAACCAGG TGATCGATAC CGACTTGCAA
CTTTTTCGCC AGGTAAATGA CCGTGAATTG ATGGTACTGC AACTTTTCGC TCAAGGCCGC
AGCAACAAGG AAATCGCCAA GGGCATGTTT CTCAGCAGCA AGACCGTCAG CACCTACAAG
AAGCGCCTCA TGCACAAGCT ACAGGTCAAC ACGCTGGTCG ACTTGATCGA GATGGCCAAG
CGCAATGCGC TGGTCTGA
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| Protein sequence | MHSIFIVDDH PVIRLAVRML LENQNYKIVG ESDNGVDAMQ MIRESNPDLV ILDISIPKLD
GLEVLSRFQS MALPLKVLVL TAQSPALFAV RCMHSGAAGY VCKQEDLSEL LSAIKAVLAG
YNYFPSQAIK HNQVIDTDLQ LFRQVNDREL MVLQLFAQGR SNKEIAKGMF LSSKTVSTYK
KRLMHKLQVN TLVDLIEMAK RNALV
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