Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1581 |
Symbol | |
ID | 5869361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1780774 |
End bp | 1783854 |
Gene Length | 3081 bp |
Protein Length | 1026 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546699 |
Product | acriflavin resistance protein |
Protein accession | YP_001667822 |
Protein GI | 167032591 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.270184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTTA CCGATGTCTT CGTGCGCCGG CCGGTGCTGG CGCTGGTGGT CAGCAGCCTG ATCATCCTGA TGGGGCTGTT TGCCATGGGC AAATTGCCGA TCCGCCAGTA CCCCTTGCTG GAAAGCTCGA CCATTACCAT CAGTACCGAG TACCCCGGCG CCTCCGCCGA GCTGATGCAG GGTTTTGTGA CCCAGCCGAT TACCCAGGCG GTGTCGTCGG TCGAGGGCAT CGACTACCTG TCGTCGTCCT CGCAGCAGGG GCGCAGCCTG ATCACGTTGC GCATGGTGCT CAACCGCGAC TCGACCCAGG CGCTGGCCGA GACCATGGCC AAGGTCAACC AGGTGCGCTA TCGCCTGCCG GAAAAGGCCT ACGACCCGGT GGTAGAGCTT TCGGCTGGCG ACTCCACGGC GGTAGCCTAC GTGGGCTTTG CCAGCGACAG CCTGTCGATA CCGGAGCTGA GCGATTACCT GTCGCGGGTG GTGGAACCGC AGTTTTCTGG CATCGACGGC GTGGCCAAGG TGCAGTCGTT TGGCGGGCAG CGCCTGGCCA TGCGCCTGTG GCTGGACAGT GAACAGATGG CTGGGCGCGG GGTGACAGCA GCGGACGTGG CGCAGGCGGT GCGGGCCAAC AACTACCAGG CGACGCCGGG CCAGGTGCGC GGACAATACG TGCTGGCCGA CATCCAGGTG GACACCGACC TGACCCGGGT CGAGGACTTC CGTGAGCTGA TCATTCGCAA CGATGGCACC GATTTGGTAC GCCTGCGCGA TGTCGGCACC GTCGAGCTGA ATGCGGCGGC CACCCAGACC AGCGCCACCA TGGATGGCAG GCCTGCCGTG CACCTGGGGC TGTTCCCCAC GCCGACCGGC AACCCACTGG TGATCGTCGA GGGTATTCGC CAACTGTTGC CGCAGATTCA GCAGACCCTG CCACCCGGTG TGCATGTGGC GCTGGCCTAC GAGACCGCAC GTTTCATCGA CGCTTCGATC CATGAAGTGC TGCGCACCTT GGTGGAGGCG ATGCTGATCG TGGTGCTGGT GATCTGGCTG TGCCTGGGTT CGCTGCGCAG CGTGCTGATT GCGGTGGTTG CCATCCCGCT GTCGATGCTC GGTGCCGCGG GCCTGATGTT GCTGTTCGGC TTCAGCCTCA ACCTGCTGAC GTTGCTGGCG ATGGTGTTGG CCATCGGCTT GGTGGTGGAC GATGCCATCG TGGTGGTGGA GAACGTGCAC CGGCATATCG AAGAGGGCAG GTCACCGGTC GCTGCGGCAT TGATCGGGGC ACGGGAAATC GCCGGGCCGG TGATCGCCAT GACCCTGACC CTGGCGGCGG TGTATGCGCC GATCGGGCTG ATGGGCGGGC TGACCGGCAC GCTGTTCCGC GAATTTGCCC TGACCTTGGC GGGAGCGGTG ATCGTTTCGG GCATCGTGGC GCTGACGTTG TCGCCGGTAA TGAGCTCGTT GCTATTGCAA CCCGGACAGC AGCATGGCGC GATGGCCAAC ATGGCCGATC GGTTGTTCGC TGGGTTGACT GGCGCCTATG GACGGGTGCT GGCCTACACC CTGACACATC GCTGGATCAG TGGCGGCGTG GCGCTGCTGG TGTGCCTGAG CCTGCCCTGG CTGTACCTGC TGCCCCAGCG TGAGCTGGCC CCGGCCGAGG ACCAGGCGGC GGTGCTGACC GCCATCAAGT CGCCGCAGCA TGCCAGCTTG GAATATGTGG AGCACTTTGC GCTGAAACTG GACGAGGTGA TGAAGTCCAT CGGCGAAACC ACCGACACCT GGATCATCAA CGGCACCGAC GGCCCGGCCG CCAGTTTTGG TGGCATCAAC CTCAGCGCCT GGCAGGTGCG CGAGCGTTCT GCCGCGCAGG TGCAGGCACA GTTGCAGCAG GCAGTGGCGG ATATCGAAGG CAGCAGCATC TTCGCCTTCC AGGTCGCTTC GCTGCCGGGT TCCAGTGGCG GCCTGCCGGT GCAGATGGTG CTGCGCAGTG CCCAGGATTA CCCCGAGCTG TACCAGACCA TGGAGGTGCT CAAGCAGCGC GCCCGCGACA GCGGGCTGTT TGCCGTGGTG GACAGCGACC TCGACTACAA CAACCCAGTG GTCAAGGTGC GCGTCGACCG CGCCAAGGCG GCTAGCCTGG GCATCAGCAT GCAGGCCATT GGCGAGTCGC TGGGGGTGCT GGTGGGCGAG CAGTACCTCA ACCGTTTCGC CCTGTTCGGG CGGTCCTATG ACGTGATCCC GCAGAGTATT CAGGACCAGC GCCTGACGCC TGCGGCGCTC AATCGTCAAT ACGTGCGCGC CGAAAACGGC AGCCTGGTGC CGTTGGCTAC GGTGGTGCAC CTGGATATCG AGGTGGCGCC CAACCGCCTA TTGCAGTTCG ATCAGCAGAA CGCCAGTACC CTGCAGGCGA TCCCGGCGCC AGGAGTGTCG ATGGGCAACG CCGTGGCATT TCTCGAACAG CTCACCACCG AACTGCCGCC GGGCTTCAGC CACGATTGGC AATCGGAGTC GCGCCAGTAT GTGCAGGAGG GTTTTGCCTT GATGTGGGCG TTTCTCGCTG CCTTGGTGGT GATCTACCTG GTGCTGGCGG CGCAGTACGA AAGCCTGGTC GACCCGTTGA TCATTCTGGT GACCGTGCCG CTGTCGATCT GCGGCGCACT GCTGCCGCTG GCGCTGGGCT GGGCCACGTT GAACATCTAC ACGCAGATTG GCCTGGTGAC GCTGATCGGC CTGATCAGCA AGCACGGCAT CCTGATGGTG GAGTTCGCCA ACGAGATCCA GGTGCGCGAC AACCTTGATC GTGCTGCCGC CATTGTCCGA GCTGCGCAGA TACGCTTGCG GCCGGTGCTG ATGACCACGG CGGCGATGAC CTTTGGCGTG CTGCCACTGC TGTTCGCCAG TGGCGCCGGG GCCAATAGCC GCTTCGGGCT GGGGGTGGTG ATTGTGTGCG GGATGCTGGT GGGTACGTTG TTTACCTTGT TCGTGTTGCC GACGATCTAT GGGTGGTTGG CGCGAGATCA TCGGGTGACC ACGGGGCGGG CGCAGCAGTT GCTGGAGGCT GAACGCGTTC TGGGTATGTG A
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Protein sequence | MKFTDVFVRR PVLALVVSSL IILMGLFAMG KLPIRQYPLL ESSTITISTE YPGASAELMQ GFVTQPITQA VSSVEGIDYL SSSSQQGRSL ITLRMVLNRD STQALAETMA KVNQVRYRLP EKAYDPVVEL SAGDSTAVAY VGFASDSLSI PELSDYLSRV VEPQFSGIDG VAKVQSFGGQ RLAMRLWLDS EQMAGRGVTA ADVAQAVRAN NYQATPGQVR GQYVLADIQV DTDLTRVEDF RELIIRNDGT DLVRLRDVGT VELNAAATQT SATMDGRPAV HLGLFPTPTG NPLVIVEGIR QLLPQIQQTL PPGVHVALAY ETARFIDASI HEVLRTLVEA MLIVVLVIWL CLGSLRSVLI AVVAIPLSML GAAGLMLLFG FSLNLLTLLA MVLAIGLVVD DAIVVVENVH RHIEEGRSPV AAALIGAREI AGPVIAMTLT LAAVYAPIGL MGGLTGTLFR EFALTLAGAV IVSGIVALTL SPVMSSLLLQ PGQQHGAMAN MADRLFAGLT GAYGRVLAYT LTHRWISGGV ALLVCLSLPW LYLLPQRELA PAEDQAAVLT AIKSPQHASL EYVEHFALKL DEVMKSIGET TDTWIINGTD GPAASFGGIN LSAWQVRERS AAQVQAQLQQ AVADIEGSSI FAFQVASLPG SSGGLPVQMV LRSAQDYPEL YQTMEVLKQR ARDSGLFAVV DSDLDYNNPV VKVRVDRAKA ASLGISMQAI GESLGVLVGE QYLNRFALFG RSYDVIPQSI QDQRLTPAAL NRQYVRAENG SLVPLATVVH LDIEVAPNRL LQFDQQNAST LQAIPAPGVS MGNAVAFLEQ LTTELPPGFS HDWQSESRQY VQEGFALMWA FLAALVVIYL VLAAQYESLV DPLIILVTVP LSICGALLPL ALGWATLNIY TQIGLVTLIG LISKHGILMV EFANEIQVRD NLDRAAAIVR AAQIRLRPVL MTTAAMTFGV LPLLFASGAG ANSRFGLGVV IVCGMLVGTL FTLFVLPTIY GWLARDHRVT TGRAQQLLEA ERVLGM
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