| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1580 |
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| Symbol | |
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| ID | 5869360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1779680 |
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| End bp | 1780777 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641546698 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001667821 |
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| Protein GI | 167032590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.186167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.460313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GGACGTTATT GGCCTGGGCC GGCGCTGTAG CCGGTGTGCT GGCCGCTGCC
TATGCGTTGG TGGGTAGCGG CTCGGCGCCA CCCGCTGCGG CGGCGTGGCC GGCGACCAAG
GTGGCCTTGG CCACGGCCGA GCAGGTGCAG TTGGCGCGGC AGAACTTTGC GTCGGGGGAG
CTGGAGGCGG TCAACCAGGT GCAGGTGGCG GCTGAGACGG CGGGGCGTAT TACCCGCATC
GCCTTCGAGT CGGGGCAGAC GGTAACGGCC GGGCAGTTGC TGGTGCAGCT CAACGACGCG
CCGGAGCAGG CCCAGCGGGT GCAGTTGCGG GCAAAATTGC GTAACGCTGA AGTGGTGCTG
CAGCGCAGCC GCAAGCTGCG GGCGATGAAT GCCGTGTCGC AAGAGCTGCT GGACAACGCC
GCCACTGCCG TGGACGTGGC CAGTGGTGAG CTGCAGCATG TCGAGGCGTT GATCGCGCAG
AAGGCCATTC GCGCACCGTT TGCCGGCAAG CTCGGCATCC GTCGGGTGCA TCAGGGCCAA
TACCTGGGCG CCGGCGAGGC GATTGTCAGC CTGGCTGACA TCAGCCAGTT GCATGTGAAT
TTTGCCTTGG GCGAGCAGGC TGCCCCCGAA GTGCACGTCG GGCAAGTGCT GGCACTGACG
GTGGACGCAG TGCGCGGGCA AGGCTTCCAG GCCCGGGTGG TGGCGGTCGA TCCGGTGGTC
AGCAAGGCGC GCCTGGTGCA GGTGCAGGCA GCCTTGCCGA ACCCGGATGG GCAGTTGCAG
CCGGGCATGT ACGCTGGCGT GCGCCTGGAT GCCGCGCAGC CGTCGACCGT GCTGGCCGTG
CCGGAAACCG CGATCACCTA CACCGCTTAT GGCCAGACGG TATTCGTTGC GACCCAGGAC
CCGGCGCATG GCACTCGGGT CAGCCGGGTG CGGGTAACCA CCGGTGAGCG CTGGCAAGGG
CGGGTGGAGG TCACGTCCGG CCTGGCGCCC GGTGACCGGG TGGTGGTTTC CGGCCAGTTG
AAGCTCAGTG ACGGCATGCC GGTCGAGCCC GTGGCGCAGG ACAGCCTGCA GGCCAGCCAG
GGAGGGCGGC AGTCGTGA
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| Protein sequence | MNKRTLLAWA GAVAGVLAAA YALVGSGSAP PAAAAWPATK VALATAEQVQ LARQNFASGE
LEAVNQVQVA AETAGRITRI AFESGQTVTA GQLLVQLNDA PEQAQRVQLR AKLRNAEVVL
QRSRKLRAMN AVSQELLDNA ATAVDVASGE LQHVEALIAQ KAIRAPFAGK LGIRRVHQGQ
YLGAGEAIVS LADISQLHVN FALGEQAAPE VHVGQVLALT VDAVRGQGFQ ARVVAVDPVV
SKARLVQVQA ALPNPDGQLQ PGMYAGVRLD AAQPSTVLAV PETAITYTAY GQTVFVATQD
PAHGTRVSRV RVTTGERWQG RVEVTSGLAP GDRVVVSGQL KLSDGMPVEP VAQDSLQASQ
GGRQS
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