| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1577 |
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| Symbol | |
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| ID | 5869357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1777326 |
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| End bp | 1778579 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546695 |
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| Product | outer membrane porin |
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| Protein accession | YP_001667818 |
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| Protein GI | 167032587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.107742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.53028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTG CTGTGTTCCG TGGGGCCACG TGTGGCCTGC TCTGCGGCTG GCTGCCTGTT
GCCGGCGCTG CCGGTTTCGT CGATGACAGC AAGCTCAAGC TTCAACTACG CAACGTCTAC
TTCAACGAGA ATTTCCGCGA CGAACACGGC ATGAGTGCAC GTGCTGCCGC TAGCGCCAAA
AGCGAGCGGG TGGAGTGGGC ACAGGGTTTT CTGCTGGACT ACCAATCCGG ATTCACACCC
GGCGCATTGG GCGTGGGGCT GGACGCCCTC GGGCTGGTGG GTGTCAGGCT GGACTCTGGC
CGTGGGCGCA GCGGCACCGG GCTGCTGCCG GTTCATGACG ACGGCCGTGC GGCGGACGAA
TTTGCCAGCG CCGGGGTAAC GGCCAAGGCC CGCGTCGGGC AGACTGTGGT CAAGCACGGT
ACCTTGCTGC CGAAAACGCC GGTGCTGGTC TACAACGACG CGCGGCTGTT GCCGCAGACG
TACGAGGGTA CCCAGCTGAC CAGTACGGAT ATCGACGGGC TGACACTGAC AGCGGGCCAC
CTGGACCGCT TCAAACAGCG TGATTCATCG GACAGCACCG GCCTGTACCT GGATGGGTAC
GCGGGCGGCA GGTCCGGTGG CTTCAACTTC GCCGGCGCCG ATTATGCCGT CAGCAAACAA
CTGCGCCTGA GCTACTTCCA TGGCCAGCTC GAGCACTTCT ACCGGCAGGA CTTCGCCGGC
CTGGTACACG AACTGCCGCT GGCGGGTGGT GTGTTGAGCA CTGACCTGCG CTATTTCAAG
AGCCGCGACA GCGGTGCCGC CCAGGGCGGC GCAATCGACA ACGACATGTT CAGCGGGCAG
ATGGCCTATG CCCATTCGGG CCATACCCTC GGTGCCGGCT ACCAGGTGCT CGACGGTGAG
GCAGGGTTGC CTTACATCAG CGGTGCGACG GTGTATTCGT TCAGCAACGT CGGCATCGGC
AAGTTCATCG AGGAAGAAGA AAAGACCTGG ATGGCAAGCT ACGCCTACAA CTTTGCGGCA
GCAGGCGTGC CGGGCCTGAC CTTCATGGCG CGATACCTGA GTGGCGATAA TGGCCGCTCG
GGTGCCGAGG GCATCAAAGA GTGGGAACGT GACGCCGAGC TTGCCTACGT GGTGCAGGGC
GGGCCGCTGA AAGGTTTGGG TGTGAAGCTG CGCAACTATA TCTATCGTTC GGATTTTGCC
CGCGGGCGCG ACAGCAATCG CTTGTACCTT ACCTACGATA TCGCCATCTG GTGA
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| Protein sequence | MSRAVFRGAT CGLLCGWLPV AGAAGFVDDS KLKLQLRNVY FNENFRDEHG MSARAAASAK
SERVEWAQGF LLDYQSGFTP GALGVGLDAL GLVGVRLDSG RGRSGTGLLP VHDDGRAADE
FASAGVTAKA RVGQTVVKHG TLLPKTPVLV YNDARLLPQT YEGTQLTSTD IDGLTLTAGH
LDRFKQRDSS DSTGLYLDGY AGGRSGGFNF AGADYAVSKQ LRLSYFHGQL EHFYRQDFAG
LVHELPLAGG VLSTDLRYFK SRDSGAAQGG AIDNDMFSGQ MAYAHSGHTL GAGYQVLDGE
AGLPYISGAT VYSFSNVGIG KFIEEEEKTW MASYAYNFAA AGVPGLTFMA RYLSGDNGRS
GAEGIKEWER DAELAYVVQG GPLKGLGVKL RNYIYRSDFA RGRDSNRLYL TYDIAIW
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