| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1535 |
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| Symbol | |
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| ID | 5869311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1726393 |
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| End bp | 1727604 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546649 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001667776 |
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| Protein GI | 167032545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.47488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATC AATGGGATGC CGGGCGACTG GACAGTGACC TCGAGGGTGT CGGTTTCGAC
ACCCTGGCGG TGCGCGCCGG TCAAAACCGT ACACCGGAAG GCGAACACAG CGAAGCGCTG
TTCCTGACCT CCAGCTATGT GTTCCGCACA GCGGCTGATG CTGCTGCGCG CTTTGCCGGC
GAAACGCCGG GCAACGTCTA CTCGCGCTAC ACCAACCCCT CAGTGCGTGC CTTCGAGGAG
CGCCTGGCTG CAATGGAAGG CGCGGAGCAG GCCGTGGGTA CGTCCACCGG TATGGCGGCA
ATCCTGGCAG TGGTCATGTC GCTGTGCAGC GCCGGTGACC ATGTACTGGT GTCGCAGAGC
GTGTTTGGCT CCACCATCAG CCTGTTCGAG AAGTACTTCA AGCGCTTTGG CGTACAAGTG
GACTACGTGC CACTGGTCGA CCTCAATGGC TGGGAGAAGG CCATCAAGGC CAACACCAAG
CTGCTGATCG TCGAATCGCC GTCCAACCCG CTGGCCGAGC TGGTCGATAT CACCGCGCTC
AGTGAAATCG CTCATGCCCA TGGCGCCATG CTGGTAGTGG ACAACTGCTT CAGCACCCCG
GCGCTGCAGC AGCCGCTGAA ACTGGGTGCC GATATCGTGT TCCACTCGGC CACCAAGTTC
ATCGACGGCC AGGGCCGCTG CATGGGCGGT GTGGTCGCTG GCCGTGCCGA GCAGATGAAA
GAAGTGGTCG GTTTCCTGCG TACCGCAGGC CCGACGCTCA GCCCGTTCAA CGCCTGGATC
TTCACCAAGG GCCTGGAAAC GTTGCGCCTG CGCATGCGTG CGCACTGCGA AAGCGCCCAG
GCCCTGGCCG AATGGCTGGA GCAGCAGGAA GGCGTGGAAA AGGTGCATTA CGCAGGCCTG
CCGAGCCACC CGCAGCACGA ACTGGCCAAG CGCCAGATGA GCGGTTTTGG TGCGGTGGTC
AGCTTTGAAG TCAAAGGCGG TAAAGAGGGT GCCTGGCGCT TCATCGATGC CACCCGGGTG
ATTTCCATCA CCACCAACCT GGGTGACAGC AAAACTACCA TCGCGCACCC GGCCACCACC
TCCCATGGTC GCCTGTCGCC GCAGGAGCGT GAAGCTGCGG GTATCCGCGA CAGCCTGATC
CGTGTTGCCG TAGGCCTGGA AGACGTGGCC GACCTGCAAG CCGACCTGGC GCGCGGGCTG
GCTGCACTGT GA
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| Protein sequence | MTDQWDAGRL DSDLEGVGFD TLAVRAGQNR TPEGEHSEAL FLTSSYVFRT AADAAARFAG
ETPGNVYSRY TNPSVRAFEE RLAAMEGAEQ AVGTSTGMAA ILAVVMSLCS AGDHVLVSQS
VFGSTISLFE KYFKRFGVQV DYVPLVDLNG WEKAIKANTK LLIVESPSNP LAELVDITAL
SEIAHAHGAM LVVDNCFSTP ALQQPLKLGA DIVFHSATKF IDGQGRCMGG VVAGRAEQMK
EVVGFLRTAG PTLSPFNAWI FTKGLETLRL RMRAHCESAQ ALAEWLEQQE GVEKVHYAGL
PSHPQHELAK RQMSGFGAVV SFEVKGGKEG AWRFIDATRV ISITTNLGDS KTTIAHPATT
SHGRLSPQER EAAGIRDSLI RVAVGLEDVA DLQADLARGL AAL
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