Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1519 |
Symbol | |
ID | 5869295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1705775 |
End bp | 1706857 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546633 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_001667760 |
Protein GI | 167032529 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.676476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGATTCTGAT TCTCCCAGGT GACGGTATCG GCCCGGAAAT CATGGCCGAA GCGGTCAAGG TGCTGGAGCT GGCCAACGAC AAGTTCCAGC TCGGTTTCAG CCTGGCGCAC GACGTGATCG GCGGTGCCGC CATCGACAAG CACGGCGTGC CACTGGCCGA CGAAACCCTG GAGCGTGCGC GCCAGGCCGA TGCCGTGCTG CTGGGCGCCG TGGGTGGCCC GAAGTGGGAC AAGATCGAGC GAGACATTCG CCCGGAGCGC GGCCTGCTGA AAATCCGTTC GCAACTGGGC CTGTTCGCCA ACCTGCGCCC GGCCATCCTC TACCCGCAAC TGGCCGATGC CTCGTCGCTG AAGCCGGAAA TCGTTTCGGG CCTGGACATC CTCATCGTTC GTGAGCTGAC CGGTGGTATC TACTTCGGTG CCCCGCGTGG CCAGCGCGAG CTGGAAGGCG GCGAGCGCCA GGCCTACGAC ACCCTGCCTT ACAGCGAGAG CGAAGTGCGC CGCATTGCCC GTGTCGGCTT CGACATGGCC CGCGTGCGCG GCAAGAAGCT GTGCTCGGTG GACAAGGCCA ACGTCCTGGC CTCCAGCCAG CTGTGGCGTG AAGTGGTCGA AGACGTGGCC AAGGACTACC CGGATGTGGA ACTGAGCCAC ATGTACGTCG ACAACGCGGC CATGCAGCTC GTTCGTGCCC CCAAACAGTT CGACGTGATG GTGACCGACA ACATGTTCGG TGACATTCTG TCGGATGAAG CTTCCATGCT GACCGGTTCC ATCGGCATGC TGCCTTCGGC GTCGTTGGAT GCCGACAACA AGGGCATGTA CGAGCCGTGC CACGGCTCGG CGCCGGACAT CGCAGGCCTT GGCATCGCCA ACCCGCTGGC GACCATCCTG TCGGTGTCGA TGATGCTGCG TTACAGCTTC AATCAGTCGG CTGCCGCCGA GGCGATCGAG AAGGCCGTGA GCCTGGTTCT GGACCAGGGC CTGCGCACCG GCGACATCTT CTCCGAAGGC TGCCGCAAAG TTGGTACGCA GGAAATGGGC GACGCAGTAG TCGCAGCGCT GCGGAATCTG TAA
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Protein sequence | MSKQILILPG DGIGPEIMAE AVKVLELAND KFQLGFSLAH DVIGGAAIDK HGVPLADETL ERARQADAVL LGAVGGPKWD KIERDIRPER GLLKIRSQLG LFANLRPAIL YPQLADASSL KPEIVSGLDI LIVRELTGGI YFGAPRGQRE LEGGERQAYD TLPYSESEVR RIARVGFDMA RVRGKKLCSV DKANVLASSQ LWREVVEDVA KDYPDVELSH MYVDNAAMQL VRAPKQFDVM VTDNMFGDIL SDEASMLTGS IGMLPSASLD ADNKGMYEPC HGSAPDIAGL GIANPLATIL SVSMMLRYSF NQSAAAEAIE KAVSLVLDQG LRTGDIFSEG CRKVGTQEMG DAVVAALRNL
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