Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1494 |
Symbol | |
ID | 5869263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1677340 |
End bp | 1678542 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546601 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001667735 |
Protein GI | 167032504 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACGTA AATTCCTGCT GTTGCTGGAA ATGGGTCTGA TCCTCGCCGG CCTGGCGCTA GGCTGGTCGG CCTGGAAGGT CAACTCGGTC CTGGAGCAGC CCTTGCACGT GACGCAGGAG CGCCTGCTCG ACGTGCCCAA TGGTACTACC CCCAACCGCA TGTTCTATCG CATGCAAACG GAAGGGTTGC TCGACGACGC CGTCTGGTTG CGCTTGTACT GGCGCTTCAA CATGGCGGGT ACCCCGCTGC ATACCGGAGA GTATCGCCTT ACCCCCGGCA TGACCGTCGA GCAGCTGTTC GATGCCTGGC GCCGGGGCGA CGTGGTGCAG TACAACCTGA CCTTGGTCGA AGGCTGGACC TTCCGCCAGG TGCGCTCGGC CGTGGCCAAG CATGAAAAGA TCAAACATAC CCTGGAGGGC TTGTCGGACG CCGAGGTCAT GGACAAGCTC GGCCATACCG GTGTGTTCCC CGAAGGCCGC TTCTTCCCGG ACACCTACCG CTTCGTACGG GGCATGAGTG ACGTCGAGTT GCTGCAGCAG GCCTACATGC GCCTGGATGA AGTGTTGGCC AAGGAGTGGG CCGAACGCAC GACCGACCTG CCGTATCGCG ACCCGTACCA GGCGTTGATC ATGGCCTCCC TTGTGGAAAA GGAAACCGGA ATTCCGCAGG AGCGCGGGCA GATTGCCGGC GTGTTCGTGA GGCGCATGCG CCTGGGCATG ATGCTGCAGA CCGACCCGAC AGTGATCTAC GGCATGGGTG AACGCTACAA CGGCAAGATC ACCCGCGCCG ACCTGCGCGA GCCTACGCCC TACAACACCT ACACCATGAC AGGCCTGCCG CCGACCCCGA TCGCCATGGT TGGCCGCGAG GCTATTCACG CGGCGCTGAA CCCGTCCGAT GGCACCAGCC TGTACTTCGT CGCTCGTGGC GATGGCAGCC ATGTGTTCTC CGATGACCTC GATGATCATA ACTCGGCGGT GCGCGAGTTC CAGCTCAAGC GCCGGGCGGA CTACCGTTCC AGCCCCGCGC CGCAGCAAGA CACCAAGCCA GGCGTGGATG ACGCCGACGA CGCGCAGCAG CCTGAGCCGC CAGCGGCGGA CGAGCCGGCC GCGCAGCCAG CGCCCGATGA ACCGCCCGTG CAGGATGCCC CTGCCGGCGG TGCGCAAGCG GCCGAACGGC CAACGCCTGA CGAACAACAT TGA
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Protein sequence | MRRKFLLLLE MGLILAGLAL GWSAWKVNSV LEQPLHVTQE RLLDVPNGTT PNRMFYRMQT EGLLDDAVWL RLYWRFNMAG TPLHTGEYRL TPGMTVEQLF DAWRRGDVVQ YNLTLVEGWT FRQVRSAVAK HEKIKHTLEG LSDAEVMDKL GHTGVFPEGR FFPDTYRFVR GMSDVELLQQ AYMRLDEVLA KEWAERTTDL PYRDPYQALI MASLVEKETG IPQERGQIAG VFVRRMRLGM MLQTDPTVIY GMGERYNGKI TRADLREPTP YNTYTMTGLP PTPIAMVGRE AIHAALNPSD GTSLYFVARG DGSHVFSDDL DDHNSAVREF QLKRRADYRS SPAPQQDTKP GVDDADDAQQ PEPPAADEPA AQPAPDEPPV QDAPAGGAQA AERPTPDEQH
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