Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1486 |
Symbol | |
ID | 5869255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1671087 |
End bp | 1671614 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641546593 |
Product | hypothetical protein |
Protein accession | YP_001667727 |
Protein GI | 167032496 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.909701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAATG ACCCGATTCC ACCTCACGTT GACCCGCGCA AATTAGCCGA TCGTGGCGTA ACCCTTAACG GTTCGCTGCA ACTCGCTGAT TTGGAAAGAC TCTGCGACCC GCTTTCCGAC AATGTCGGTA CGGTGCAGGC GAAGTTCGAT TTTGAACGAG ATGAACAGCA CGTGGTGGTT ATCCACAGCG AGCTGGACGT CGAGGTCAAG ATGGTTTGCC AGCGTTGTCT TGAGCTGGTC ACCCTGCCGA TCCACAGCGA ATGTACTTAC GCCGTGGTGA AGGAGGGTGC GAATACCCAG TCGTTGCCGA AAGGCTATGA CGTGCTGGAA CTGGGCGAAG ATCCTTTGGA TCTGCAGGCG CTGGTCGAGG AGGAGCTTCT GCTCGCCTTG CCAATCGTGC CTGCTCATCA TCCGGAAGAA TGCCAGCAGC CGGCGGGCGC AGACGAGCCC GATTCGAGCA AGGACGAGGT ATCGCGGTCC AACCCGTTCA GTGTTTTGGC GCAGTTAAAG CGTGACCCAA ACGTTTAG
|
Protein sequence | MLNDPIPPHV DPRKLADRGV TLNGSLQLAD LERLCDPLSD NVGTVQAKFD FERDEQHVVV IHSELDVEVK MVCQRCLELV TLPIHSECTY AVVKEGANTQ SLPKGYDVLE LGEDPLDLQA LVEEELLLAL PIVPAHHPEE CQQPAGADEP DSSKDEVSRS NPFSVLAQLK RDPNV
|
| |