Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1471 |
Symbol | |
ID | 5869240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1655307 |
End bp | 1656086 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546578 |
Product | ABC-2 type transporter |
Protein accession | YP_001667712 |
Protein GI | 167032481 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG AACTGCGCAC CAACTGGGTC GCCCTGAACA CCATCGTCTA CCGCGAGGTG CGGCGCTTCT TGCGCATTTG GCCGCAAACG TTGCTGCCAC CAGCGATCAC CATGGTGCTG TACTTCGTCA TCTTCGGTAA CCTGATCGGT CGGCAGATCG GCGATATGGG TGGTTTCACC TACATGCAGT ACATCGTGCC GGGGCTGATC ATGATGTCGG TGATCACCAA CTCCTATGGC AACGTGGTGT CGAGCTTCTT CGGCAGCAAG TTCCAGCGCT CGATCGAAGA GCTGATGGTG TCGCCGGTGT CGCCGCACAC CATCTTGGTC GGCTATGTAT TGGGGGGCGT GCTGCGCGGT CTGGCGGTTG GGGTGATCGT GACCATTTTG TCGATGTTCT TCACCGACCT GCAGGTGCAT CACCTGGGCG TGACCGTGAT CGTGGTGCTG CTCACTGCCA CCATCTTCTC GCTGCTGGGC TTCGTCAACG CGGTGTTCGC CCGTAATTTC GACGATATCT CGATCATCCC GACCTTCGTG CTGACGCCGC TGACCTACCT GGGCGGCGTG TTCTACTCGA TCAACCTGCT GCCGCCGTTC TGGCAGACCG TGTCGTTGGC CAACCCGGTG CTGCACATGG TCAACTCATT CCGCTACGGC ATCCTAGGGG TGTCGGATAT CAGCATTGGC ACGGCGATCA CCTTCATGCT GGTGGCCACT GCGGTGCTCT ACCTGCTGTG CGTGCGCCTG CTGGTCAGCG GTCGCGGCAT GCGTGCATGA
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Protein sequence | MSVELRTNWV ALNTIVYREV RRFLRIWPQT LLPPAITMVL YFVIFGNLIG RQIGDMGGFT YMQYIVPGLI MMSVITNSYG NVVSSFFGSK FQRSIEELMV SPVSPHTILV GYVLGGVLRG LAVGVIVTIL SMFFTDLQVH HLGVTVIVVL LTATIFSLLG FVNAVFARNF DDISIIPTFV LTPLTYLGGV FYSINLLPPF WQTVSLANPV LHMVNSFRYG ILGVSDISIG TAITFMLVAT AVLYLLCVRL LVSGRGMRA
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