Gene PputGB1_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1468 
SymbolfadE 
ID5869237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1650971 
End bp1653418 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content65% 
IMG OID641546575 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001667709 
Protein GI167032478 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.890646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGT TGTGGTTGGT AGTGCTGGTG ATCGGCGCGG CATACCTCAC GCATCGGCGC 
CTGGCGCCCT TGCAGATTCT GGGCATCATG GCGGCCTACG TGCTGCTGAT GGGCATTTTC
AGCAGTGCAC CCGGCTGGTT GCTGACCCTG ATCTGGGGGG TACTGGCCTT GAAAATCGCC
CTGGTTGCGC TCCCGGACTG GCGCCGCAAG GTGTTCACCG GGCCGGTTTT CAACTGGTTC
CAGCGTACCT TGCCGCCCAT GTCGCAAACC GAGCGCGAAG CGATCGATGC CGGCACGGTG
TGGTGGGACG GCGAACTGTT CAGCGGCCGC CCCGACTGGC GTACCTTGCT GGCCTACCCG
GCACCGAAAC TGACCGACGA AGAACAGGCC TTCATCGACG GCCCCACTGA AGCGCTGTGC
GCCATGGTCA GCGACTGGCA GATCGGTCAG GACCTGGACC TGCCACCCGA AGCCTGGGGT
CACATCAAGC AGCATGGCTT CTTCGCCCTG ATCATCCCCA AGGAATACGG CGGCAAAGGC
TTTTCGGCCT ACGCTCATTC CCAGGTGGCG ATGAAACTGG CCACCCGCAG CGGCGATCTC
GCCTCCACGG TGATGGTGCC CAACTCGCTC GGCCCGGCCG AATTGCTGCT GCATTACGGC
ACCGACGAAC AACGCAACCA TTACCTGCCA CGCCTTGCCC GCGGCGACGA GATCCCCTGC
TTTGCCCTGA CCGGCCCGTT GGCCGGCTCC GATGCCGGCG CCATGCCCGA CACCGGCATC
ATCTGCAAAG GCCAGTGGAA CGGCGAAGAA GTGCTGGGCC TGCGGCTGAA CTGGGAAAAG
CGCTATATCA CCCTGGGCCC GGTCGCGACC TTGCTGGGCC TGGCCTTCAA AGCCTACGAC
CCGGACCACC TGTTGGGCGA CGAGCAGGAG CTGGGCATCA GCCTGGCCTT GATCCCCACC
GACACGCCCG GTGTCGAAAT CGGCAAGCGC CACCTGCCGC TGGGGGCCGC CTTCATGAAC
GGCCCCAACA GCGGCAAGGA CGTGTTCGTG CCGCTGGACT TCCTGATCGG TGGGCAGGCC
ATGCTCGGCA AGGGCTGGAT GATGCTGATG AACTGCCTGT CGGTAGGCCG TTCGATTTCC
CTGCCTGCGG TCGGCACCGG CGCGGCCAAG TACACCAGCC TGGTCACCGG CCAGTACGCC
AATATCCGCG AACAGTTCAA CGTGCCACTG GCCGCTTTCG AAGGCATCCA GGAATCGCTG
GCACGCATTG GCGGCAACGC CTGGCTGATG GACAGCGCCC GCCTGCTGAC CGCCAAGGCC
GTGGACCTCG GTGAAAAGCC TTCGGTGCTG TCGGCGATTC TGAAGTACCA CCTCACCGAG
CGCGGCCGCG AATGCATCCA GCACGCCATG GACGTGCACG GCGGCAAGGC CATCATCATG
GGGCCGAACA ACTACCTGGG GCGCAACTGG CAAGGGGCAC CGATCTTCAT CACGGTCGAA
GGCGCCAACA TCCTTTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCCAT CCGCTGCCAT
CCGTTCGTGC TCAAGGAAAT GGCTTTGGTC GGCCGTGAGG ACCGTGACCA GGCGCTGCGG
GAGTTCGACG AGCTACTGAT GAGGCACATC ATGTTCGCCG CCGGCAACGC GGCCAGCACG
TTGGTGTTCA ACCTGGGGCT AGGGCGCTTC GAGTCGGTAC CGGGTGATGC ATTGAGCCAA
GGGTATTTCC GCGCCCTCAA CCGCCAGGCT GCCGCTTTCG CCCTGCTGGC CGACCTGTCG
ATGATGCTGC TGGGTGGCGC GCTCAAGCGC CGCGAACGCC TGAGTGCGCG CCTGGGCGAT
GTGCTCAGCT ACCTGTACCT GTCCAGCGCC GCGCTCAAGC GCTACCACGA CCTGGGCTCA
CCCGAGCACA TGCAGCCACT GCTGCGCTGG GCCATGGAAG AAAGCCTGGG CCAGGCGGAA
AAGGCGCTGG ACCGGCTGCT CGACAACTTC CCCAACCGAT TTGTCGGTTG TGTTCTGCGC
GTGCTGGTGT TCCCCTTCGG CCGCCGCCAT ACCGGGCCGA GCGATGAGCT GGATGCCGAA
GTGGCGGCGC TGATCGGCCG CAGCAAGGGC GACCCGGCGC TGGAGGAATT GCTCGCCGGC
TGCTTCCGAC CCCAGGCCGA GGGTGACCCG GTGGCAGCAT TGCAACGGGC CTGCAACCTA
CTAGACGAGA CTGCGCCACT GCACAAAGTG CTGCATCAGG CGCTTAAGGA GGGCAAGGTA
CAGCCGGCAC CTGGGCAGTC GGCCATCGAT GCGGCAGTCC AGAGTGGTGC ATTACAGGCT
GACGAGGGTC AACGCTTACA GGCGGCGGAG CAGGCACGCC GGGCAGTGAT CGATGTGGAT
GCCTTCGACA AGGCGCAACT GCTTCCGGAG CAGGGCAAGG TGCGATGA
 
Protein sequence
MLLLWLVVLV IGAAYLTHRR LAPLQILGIM AAYVLLMGIF SSAPGWLLTL IWGVLALKIA 
LVALPDWRRK VFTGPVFNWF QRTLPPMSQT EREAIDAGTV WWDGELFSGR PDWRTLLAYP
APKLTDEEQA FIDGPTEALC AMVSDWQIGQ DLDLPPEAWG HIKQHGFFAL IIPKEYGGKG
FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGDEIPC
FALTGPLAGS DAGAMPDTGI ICKGQWNGEE VLGLRLNWEK RYITLGPVAT LLGLAFKAYD
PDHLLGDEQE LGISLALIPT DTPGVEIGKR HLPLGAAFMN GPNSGKDVFV PLDFLIGGQA
MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA NIREQFNVPL AAFEGIQESL
ARIGGNAWLM DSARLLTAKA VDLGEKPSVL SAILKYHLTE RGRECIQHAM DVHGGKAIIM
GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALV GREDRDQALR
EFDELLMRHI MFAAGNAAST LVFNLGLGRF ESVPGDALSQ GYFRALNRQA AAFALLADLS
MMLLGGALKR RERLSARLGD VLSYLYLSSA ALKRYHDLGS PEHMQPLLRW AMEESLGQAE
KALDRLLDNF PNRFVGCVLR VLVFPFGRRH TGPSDELDAE VAALIGRSKG DPALEELLAG
CFRPQAEGDP VAALQRACNL LDETAPLHKV LHQALKEGKV QPAPGQSAID AAVQSGALQA
DEGQRLQAAE QARRAVIDVD AFDKAQLLPE QGKVR