| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1443 |
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| Symbol | |
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| ID | 5869208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1611143 |
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| End bp | 1612825 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546547 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001667686 |
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| Protein GI | 167032455 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.31662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.276111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG AAACCGGCGG CTTCGCCGCT CTCGATCTTA ATCCGAACAT TGTTGCTGCC
GTTGTGGCTA CCGGCTACGA AGAGCCGTCC GCCATTCAGC AACAATCGAT CCCGATCATC
CTCGCCGGTC ACGACATGAT CGGCCAGGCG CAGACTGGCA CCGGCAAAAC CGCTGCCTTC
GCCCTGCCGA TCCTCAACAA GATCGATGTG AGCAAGCGCG AACCGCAAGC CCTGATCCTG
GCGCCAACCC GTGAGTTGGC GCTGCAAGTT GCTACCGCTT TCGAAACCTA CGCCAAGCAG
ATGCCGGGCG TTAACGTTGT CGCCGTCTAC GGTGGTGCCC CGATGGGCCC ACAGCTGCGC
GCAATCCGTA ATGGCGCGCA AATCGTCGTG GCCACCCCGG GCCGTCTGTG CGACCACCTG
CGTCGTGACG AAAAAGTCCT GTCGACCGTA CAGTACCTGG TACTGGACGA AGCCGACGAG
ATGCTGAAGC TGGGCTTCAT GGATGACCTC GAAGTGATCT TCGACGCAAT CCCGGCTACC
CGTCAGACCG TCCTGTTCTC CGCTACCCTG CCGTCGTCGA TCCGTTCGAT CGCCGAGCGT
CACCTGCGCG AACCCAAGCA CGTCAAGATC CAGACCAAGA CCCAGACCGT TACCGCGATC
GAGCAGGCCC ACCTGATGGT CCACGCCGAC CAGAAGATCC CGGCTGTGCT GCGTCTGCTG
GAAGTGGAAG AGTTCGACGC ACTGATCGCC TTCGTGCGCA CCAAGCAAGC CACCCTGGAC
CTGGCCGCCG CGCTGGAAGC CAAGGGCTAC AAGGCTGCCG CGCTGAACGG CGACATCGCC
CAGAACCAGC GTGAGCGCGT GATCGACTCG CTCAAGGATG GCCGCCTGGA CATCGTCGTC
GCTACCGACG TCGCTGCCCG TGGCCTGGAC GTACCGCGCA TCACTCACGT GTTCAACGTT
GATATGCCGT ACGACCCGGA GTCCTACGTT CACCGTATCG GCCGTACCGG CCGTGCCGGT
CGCGATGGCC GCGCACTGCT GCTGGTCACC CCGCGTGAGC GCCGCATGCT GCAGGTGATC
GAGCGTGTAA CCGGGCAGAA GGTTGCCGAA GCGCGCCTGC CGAACGCTCA GGCCGTGCTC
GATGCCCGCA TCAAGAAGCT GACGTCGAGC CTGGCGCCGC TGGTGGCCGA AGCTGAAGCC
ACCCACGGCG AGCTGTTCGA CCGCCTGACC AGCGACCTGG GTTGCAGTGC GCGTGCCCTG
GCTTCGGCCT TGCTGCGCAA AGCCACCAAT GGCCAGGCGC TGGACCTGGC TGCGGTAGAG
CGTGAGCAGC CGCTGGTGCC GGGCGTTGGT GCCCCGCGTG GCGAGCGTAG CGAGCGTCCT
GACCGTGGCG AGCGCCCTGA CCGTGGTGAC CGCGAGCGCC GCGCGCCGCT GCCGCTGGCC
GAAGGCCGTG TACGTTGCCG TACCGCCCTG GGTGCCCGTG ACGGTATCGC TGCCAAGAAC
CTGTTGGGCG CGATCCTCAA CGAGGGTGGC CTGGCGCGTG ACGCCATTGG CCGTATCCAG
GTACGCGACA GCTTCAGCCT GGTCGAGCTG CCGGAAGACG GCCTGGAGAA GCTGCTGTCC
AAGCTCAAGG ACACCCGCGT GGCTGGCAAG CAGCTGAAGC TGCGTCGCTA CCGCGAGGAT
TGA
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| Protein sequence | MTQETGGFAA LDLNPNIVAA VVATGYEEPS AIQQQSIPII LAGHDMIGQA QTGTGKTAAF
ALPILNKIDV SKREPQALIL APTRELALQV ATAFETYAKQ MPGVNVVAVY GGAPMGPQLR
AIRNGAQIVV ATPGRLCDHL RRDEKVLSTV QYLVLDEADE MLKLGFMDDL EVIFDAIPAT
RQTVLFSATL PSSIRSIAER HLREPKHVKI QTKTQTVTAI EQAHLMVHAD QKIPAVLRLL
EVEEFDALIA FVRTKQATLD LAAALEAKGY KAAALNGDIA QNQRERVIDS LKDGRLDIVV
ATDVAARGLD VPRITHVFNV DMPYDPESYV HRIGRTGRAG RDGRALLLVT PRERRMLQVI
ERVTGQKVAE ARLPNAQAVL DARIKKLTSS LAPLVAEAEA THGELFDRLT SDLGCSARAL
ASALLRKATN GQALDLAAVE REQPLVPGVG APRGERSERP DRGERPDRGD RERRAPLPLA
EGRVRCRTAL GARDGIAAKN LLGAILNEGG LARDAIGRIQ VRDSFSLVEL PEDGLEKLLS
KLKDTRVAGK QLKLRRYRED
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