Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1382 |
Symbol | |
ID | 5869146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1545768 |
End bp | 1546649 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546485 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001667625 |
Protein GI | 167032394 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000585484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCGCA AAGGCATCAT CCTGGCAGGT GGGTCGGGTA CCCGCTTGCA CCCCGCGACG CTGGCCATTT CCAAGCAACT GCTGCCGGTG TACGACAAGC CGATGATTTA CTACCCGCTG ACCACATTGA TGCTGGCGGG TATTCACGAC ATCCTGATCA TCTCCACCCC CCAAGACACT CCGCGCTTCG AGCAACTGCT GGGCAACGGC CACCGTTGGG GCATCAATAT CACCTACGCC GTGCAGCCAT CCCCGGACGG CTTGGCCCAG GCGTTCCTGA TTGGCGAAGA CTTCATCGGC AACGACCCCA CCGCACTGGT ACTCGGCGAC AACATCTATT ACGGCCACGA CTTCCAGCAA CTGCTGCGCA GTGCCATGGA CCGCCGGGGC AGTGCCAGCG TGTTTGCCTA CCACGTGCAG GACCCTGAAC GTTATGGTGT GGTCGAGTTC GACGGGCAGG GCAATGCGAT CAGCCTGGAA GAGAAGCCGG CCCAGCCCAA GTCCAACTAT GCCGTGACCG GGTTGTACTT CTACGACAAC GACGTGATCG AGATTGCCAA GGGCATTCGG CCGTCCACGC GTGGCGAGTT GGAGATTACC GATGTGAACC GGGCTTACCT GGAGCAGCAC CGGTTGTCGG TGGAGATCAT GGGGCGCGGG TATGCCTGGC TGGATACTGG GACGCATGAC TCGTTGCTGG AGGCTAGCGG GTATATCGCC ACGATTGAAC GGCGGCAGGG GTTGAAGGTG GCTTGTCCGG AAGAGGTGGC TTACAGGCAG GGGTGGATTG GGGCGGAGGA GTTGCTGAGG TTGGCTGAAC CGTTGGCCAA GAATGGGTAT GGGCAGTATT TGAAGCGGTT GGTGGGGGAT AGGGTTTATT GA
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Protein sequence | MKRKGIILAG GSGTRLHPAT LAISKQLLPV YDKPMIYYPL TTLMLAGIHD ILIISTPQDT PRFEQLLGNG HRWGINITYA VQPSPDGLAQ AFLIGEDFIG NDPTALVLGD NIYYGHDFQQ LLRSAMDRRG SASVFAYHVQ DPERYGVVEF DGQGNAISLE EKPAQPKSNY AVTGLYFYDN DVIEIAKGIR PSTRGELEIT DVNRAYLEQH RLSVEIMGRG YAWLDTGTHD SLLEASGYIA TIERRQGLKV ACPEEVAYRQ GWIGAEELLR LAEPLAKNGY GQYLKRLVGD RVY
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