Gene PputGB1_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1362 
Symbolcmk 
ID5869126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand+ 
Start bp1523210 
End bp1523896 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID641546465 
Productcytidylate kinase 
Protein accessionYP_001667605 
Protein GI167032374 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0105821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0198977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCGC TGGCACCGGT CATCACCATC GACGGGCCGA GCGGCTCGGG CAAGGGCACG 
GTCGCCGGCC TGCTGGCCCG TGAGCTGGGC TGGAAGCTGC TGGATTCTGG CGCGCTTTAC 
CGGTTGCTGG CATTCAATGC CAGCAACCAC GGCGTCGACC TGACCAACGA AGAGTTGCTG 
ACCAAGCTTG CCGCCCATCT GGATGTGCAG TTCATCGCCG CCGAGCCCGG TAAGCTGCAA 
CAAATCATCC TCGAGGGTGA GGACGTCAGC AACGTCATCC GTACCGAAAC CGTCGGCGCG 
GGTGCGTCGA TGGTGGCCTC GCTGCCGGCC GTGCGTGATG CACTGTTGGT GCGCCAGCGT 
GAATTCCGCG ACGTGCCGGG GCTTATCGCC GACGGCCGCG ACATGGGTAC CGTGGTGTTC 
CCGGACGCGC CATTGAAGGT CTTCCTCACC GCCAGTGCGG AGGAGCGCGC ACGTCGCCGT 
TACCTGCAGT TGAAGGGCAA GGGTGAAGAT GTTAGTCTGT CGAGTCTGCT GGATGAGATT 
CGTGCGCGTG ATGAGCGCGA CACCCAACGT GCAGTGGCCC CGCTGAAGCC AGCGGCCGAT 
GCCATTCAGT TGGACTCTAC CGAGTTGTCC ATCGAGCAGG TGTTGCAACG TATCAGAAGT 
GAAATCGCCC AGCGCGATCT CGCCTGA
 
Protein sequence
MNSLAPVITI DGPSGSGKGT VAGLLARELG WKLLDSGALY RLLAFNASNH GVDLTNEELL 
TKLAAHLDVQ FIAAEPGKLQ QIILEGEDVS NVIRTETVGA GASMVASLPA VRDALLVRQR 
EFRDVPGLIA DGRDMGTVVF PDAPLKVFLT ASAEERARRR YLQLKGKGED VSLSSLLDEI 
RARDERDTQR AVAPLKPAAD AIQLDSTELS IEQVLQRIRS EIAQRDLA