Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1335 |
Symbol | actP |
ID | 5869099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1489368 |
End bp | 1491032 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546438 |
Product | acetate permease |
Protein accession | YP_001667578 |
Protein GI | 167032347 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.384462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCC ACGCCAAAGC CCTGGCCGTA CTGGCCTGCG GAGCCTTCGC ACCCGCCGTG TGGGCCGCCG ATGCCCTGAC CGGCGAGGTG CAGAAACAAC CGCTGAACGT TTCCGCCATC GCCATGTTCG TGGCCTTCGT CGCCTTCACC CTCGGCATCA CTTACTGGGC CTCCAAACGC AACAAGTCGG CAGCGGACTA CTACGCGGCC GGCGGCAAGA TCACCGGCTT CCAGAACGGC CTGGCGATTG CTGGCGACTA CATGTCGGCG GCCTCGTTCC TGGGTATTTC CGCGTTGGTG TTCACCTCTG GCTACGACGG CTTGATCTAC TCGATCGGTT TCCTGGTCGG CTGGCCAATC ATCCTCTTCC TGATTGCCGA ACGCCTGCGC AACCTGGGCA AGTACACCTT TGCCGACGTG GCCTCGTACC GCCTCGGGCA GAAGGAAATC CGCACCCTGT CGGCCTCCGG TTCGCTGGTG GTGGTGGCCT TCTACCTGAT CGCGCAAATG GTGGGTGCCG GCAAGCTGAT CGAGCTGCTG TTCGGCCTGG ACTACCACGT GGCGGTCATC CTGGTCGGTA TCCTGATGTG CCTGTACGTG CTGTTCGGCG GCATGCTGGC CACCACCTGG GTACAGATCA TCAAAGCTGT GCTGTTGCTG TCCGGTGCCA GCTTCATGGC GCTGATGGTG ATGAAGCACG TGGGCTTCGA CTTCAACACG CTGTTCTCCG AAGCCATCAA GGTGCATGCC AAGGGCGAGG CGATCATGAG CCCCGGCGGC CTGGTCAAAG ACCCGATCTC GGCGTTCTCG CTGGGCCTGG CTCTGATGTT CGGTACCGCT GGCCTGCCGC ATATCCTGAT GCGCTTCTTC ACCGTCAGCG ATGCCAAGGA AGCGCGCAAG AGCGTGCTGT ACGCCACCGG CTTCATCGGC TACTTCTACA TCCTCACCTT CATCATCGGC TTTGGCGCGA TCCTGCTGGT CAGCACCAAC CCGGACTTCA AAGACGCCGC CGGCGCACTG TTGGGTGGCA ACAACATGGC AGCGGTGCAC CTGGCCAATG CGGTAGGTGG CAGCGTGTTC CTCGGCTTCA TCTCGGCGGT GGCTTTCGCC ACCATCCTGG CGGTGGTTGC CGGCCTGACC CTGGCCGGTG CCTCGGCGGT GTCCCATGAC CTGTACGCCA GCGTCTGGCG CAAGGGCAAG GCCAACGACA AGGACGAGAT CCGCGTGTCG AAGATCACCA CCGTCGCGCT GGGCGTGCTG GCGATCGGCC TGGGCATCCT GTTCGAGAAG CAGAACATCG CCTTCATGGT AGGCCTGGCC TTCTCCATCG CCGCCAGCTG CAACTTCCCG GTACTGTTGC TTTCGATGTA CTGGAAGAAA CTGACCACCC GCGGCGCCAT GATCGGCGGC TGGCTGGGCC TGGTGAGTGC GGTGACGCTG ATGATCCTCG GCCCGACCAT CTGGGTGCAG ATCCTTGGCC ACGAGAAGCC AATCTACCCG TACGAGTACC CGGCGCTGTT CTCGATGGCC ATTGCCTTCG TCAGCATCTG GTTCTTCTCG GTCACCGACA AGTCCAAGGC TGCTGATGAC GAGCGTGCGC TGTTCTACCC GCAGTTCGTG CGTTCGCAGA CGGGCCTGGG TGCCAGTGGG GCGGTGTCCC ACTAA
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Protein sequence | MIRHAKALAV LACGAFAPAV WAADALTGEV QKQPLNVSAI AMFVAFVAFT LGITYWASKR NKSAADYYAA GGKITGFQNG LAIAGDYMSA ASFLGISALV FTSGYDGLIY SIGFLVGWPI ILFLIAERLR NLGKYTFADV ASYRLGQKEI RTLSASGSLV VVAFYLIAQM VGAGKLIELL FGLDYHVAVI LVGILMCLYV LFGGMLATTW VQIIKAVLLL SGASFMALMV MKHVGFDFNT LFSEAIKVHA KGEAIMSPGG LVKDPISAFS LGLALMFGTA GLPHILMRFF TVSDAKEARK SVLYATGFIG YFYILTFIIG FGAILLVSTN PDFKDAAGAL LGGNNMAAVH LANAVGGSVF LGFISAVAFA TILAVVAGLT LAGASAVSHD LYASVWRKGK ANDKDEIRVS KITTVALGVL AIGLGILFEK QNIAFMVGLA FSIAASCNFP VLLLSMYWKK LTTRGAMIGG WLGLVSAVTL MILGPTIWVQ ILGHEKPIYP YEYPALFSMA IAFVSIWFFS VTDKSKAADD ERALFYPQFV RSQTGLGASG AVSH
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