Gene PputGB1_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1335 
SymbolactP 
ID5869099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1489368 
End bp1491032 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content62% 
IMG OID641546438 
Productacetate permease 
Protein accessionYP_001667578 
Protein GI167032347 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.384462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCC ACGCCAAAGC CCTGGCCGTA CTGGCCTGCG GAGCCTTCGC ACCCGCCGTG 
TGGGCCGCCG ATGCCCTGAC CGGCGAGGTG CAGAAACAAC CGCTGAACGT TTCCGCCATC
GCCATGTTCG TGGCCTTCGT CGCCTTCACC CTCGGCATCA CTTACTGGGC CTCCAAACGC
AACAAGTCGG CAGCGGACTA CTACGCGGCC GGCGGCAAGA TCACCGGCTT CCAGAACGGC
CTGGCGATTG CTGGCGACTA CATGTCGGCG GCCTCGTTCC TGGGTATTTC CGCGTTGGTG
TTCACCTCTG GCTACGACGG CTTGATCTAC TCGATCGGTT TCCTGGTCGG CTGGCCAATC
ATCCTCTTCC TGATTGCCGA ACGCCTGCGC AACCTGGGCA AGTACACCTT TGCCGACGTG
GCCTCGTACC GCCTCGGGCA GAAGGAAATC CGCACCCTGT CGGCCTCCGG TTCGCTGGTG
GTGGTGGCCT TCTACCTGAT CGCGCAAATG GTGGGTGCCG GCAAGCTGAT CGAGCTGCTG
TTCGGCCTGG ACTACCACGT GGCGGTCATC CTGGTCGGTA TCCTGATGTG CCTGTACGTG
CTGTTCGGCG GCATGCTGGC CACCACCTGG GTACAGATCA TCAAAGCTGT GCTGTTGCTG
TCCGGTGCCA GCTTCATGGC GCTGATGGTG ATGAAGCACG TGGGCTTCGA CTTCAACACG
CTGTTCTCCG AAGCCATCAA GGTGCATGCC AAGGGCGAGG CGATCATGAG CCCCGGCGGC
CTGGTCAAAG ACCCGATCTC GGCGTTCTCG CTGGGCCTGG CTCTGATGTT CGGTACCGCT
GGCCTGCCGC ATATCCTGAT GCGCTTCTTC ACCGTCAGCG ATGCCAAGGA AGCGCGCAAG
AGCGTGCTGT ACGCCACCGG CTTCATCGGC TACTTCTACA TCCTCACCTT CATCATCGGC
TTTGGCGCGA TCCTGCTGGT CAGCACCAAC CCGGACTTCA AAGACGCCGC CGGCGCACTG
TTGGGTGGCA ACAACATGGC AGCGGTGCAC CTGGCCAATG CGGTAGGTGG CAGCGTGTTC
CTCGGCTTCA TCTCGGCGGT GGCTTTCGCC ACCATCCTGG CGGTGGTTGC CGGCCTGACC
CTGGCCGGTG CCTCGGCGGT GTCCCATGAC CTGTACGCCA GCGTCTGGCG CAAGGGCAAG
GCCAACGACA AGGACGAGAT CCGCGTGTCG AAGATCACCA CCGTCGCGCT GGGCGTGCTG
GCGATCGGCC TGGGCATCCT GTTCGAGAAG CAGAACATCG CCTTCATGGT AGGCCTGGCC
TTCTCCATCG CCGCCAGCTG CAACTTCCCG GTACTGTTGC TTTCGATGTA CTGGAAGAAA
CTGACCACCC GCGGCGCCAT GATCGGCGGC TGGCTGGGCC TGGTGAGTGC GGTGACGCTG
ATGATCCTCG GCCCGACCAT CTGGGTGCAG ATCCTTGGCC ACGAGAAGCC AATCTACCCG
TACGAGTACC CGGCGCTGTT CTCGATGGCC ATTGCCTTCG TCAGCATCTG GTTCTTCTCG
GTCACCGACA AGTCCAAGGC TGCTGATGAC GAGCGTGCGC TGTTCTACCC GCAGTTCGTG
CGTTCGCAGA CGGGCCTGGG TGCCAGTGGG GCGGTGTCCC ACTAA
 
Protein sequence
MIRHAKALAV LACGAFAPAV WAADALTGEV QKQPLNVSAI AMFVAFVAFT LGITYWASKR 
NKSAADYYAA GGKITGFQNG LAIAGDYMSA ASFLGISALV FTSGYDGLIY SIGFLVGWPI
ILFLIAERLR NLGKYTFADV ASYRLGQKEI RTLSASGSLV VVAFYLIAQM VGAGKLIELL
FGLDYHVAVI LVGILMCLYV LFGGMLATTW VQIIKAVLLL SGASFMALMV MKHVGFDFNT
LFSEAIKVHA KGEAIMSPGG LVKDPISAFS LGLALMFGTA GLPHILMRFF TVSDAKEARK
SVLYATGFIG YFYILTFIIG FGAILLVSTN PDFKDAAGAL LGGNNMAAVH LANAVGGSVF
LGFISAVAFA TILAVVAGLT LAGASAVSHD LYASVWRKGK ANDKDEIRVS KITTVALGVL
AIGLGILFEK QNIAFMVGLA FSIAASCNFP VLLLSMYWKK LTTRGAMIGG WLGLVSAVTL
MILGPTIWVQ ILGHEKPIYP YEYPALFSMA IAFVSIWFFS VTDKSKAADD ERALFYPQFV
RSQTGLGASG AVSH