| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1295 |
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| Symbol | |
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| ID | 5869055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1444615 |
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| End bp | 1445889 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546394 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001667538 |
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| Protein GI | 167032307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0174718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGTT GGTATCGCCA GATCACTTCA CGGGAACGCA AGACGTTCTG GGCCTGCTTC
GGCGGTTGGT CGCTCGATGC GCTTGAAGTG CAGATGTTCG GCCTGGCTAT CCCTGCGTTG
ATCGCTGCGT TCTCCCTGAG CAAGGGCGAT GCCGGCCTGA TCAGTGGCCT GACCCTGGTG
ACCTCGGCAA TCGGTGGCTG GCTGGGCGGC ACGCTGTCCG ACCGTTACGG CCGTGTGCGA
ACCCTGCAAT GGATGATTCT CTGGTTCTCC TTCTTCACTT TCCTCTCGGC ATTCGTCACC
GGCTTTTACC CGCTGCTGTT CGTCAAGGCC ATGCAAGGCT TCGGCATCGG TGGCGAATGG
GCGGCCGGCG CGGTGTTGAT GGCCGAAACC ATCAACCCGA AATATCGTGG CAAGGTCATG
GGCACGGTAC AGAGCGCCTG GGCCGTGGGT TGGGGCCTGG CGGTGGCGCT GTTCACGTTG
ATCTACTCGC TGGTGCCGCA GGAATTCGCC TGGCGGGTCA TGTTCTTCGT CGGCCTGCTG
CCGTCACTGC TGATCATCTG GGTACGCCGC AATGTGCCCG AGCCGGACAG CTTCCAGCGC
CTGCAGAAAG AAAACGCCAT CCCCACCCGC TTCCTGCAGT CGATGGCTGG CATCTTCCGC
CCGGAACTGC TGCGCGTGAC CCTGCTGGGC GGCTTGCTCG GCCTGGGTGC TCACGGTGGC
TACCACGCGG TGATGACCTG GTTGCCGACC TTCCTCAAAA CCGAACGCAA CCTTTCAGTG
CTGAACTCCG GCGGTTACCT GGCGGTGATC ATCCTGGCCT TCTGGTGCGG CTGCGTGGTC
AGTGGCCTGC TGATCGACCG CATTGGGCGC CGCAAGAACA TCCTGCTGTT CGCGCTGTGC
TGCGTGCTGA CCGTGCAGGC CTATGTGTTC TTCCCGCTGA CCAATACCCA GATGCTGTTC
CTCGGCTTCC CGCTGGGCTT CTTCGCTGCC GGCATCCCGG CCAGCCTGGG CGCGTTCTTC
AATGAACTGT ACCCAGCTGA TGTGCGCGGG GCCGGGGTGG GCTTTTGCTA CAACTTTGGC
CGCGTGCTGT CGGCGGTATT CCCGTTCCTG GTCGGCCACA TGAGTGAGTC GATGTCGCTG
GGCAGTGCCA TTGGCATCGA TGCTGGCATT GCCTATGGCG TGGCGGTGAT CGCTGCCCTG
TGCCTGCCGG AAACCCGTGG CCGTAACCTT GAATCTGCAC CCGCGCCGGA AATGGCCGGT
GCTGCTGCCA AGTAA
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| Protein sequence | MFSWYRQITS RERKTFWACF GGWSLDALEV QMFGLAIPAL IAAFSLSKGD AGLISGLTLV
TSAIGGWLGG TLSDRYGRVR TLQWMILWFS FFTFLSAFVT GFYPLLFVKA MQGFGIGGEW
AAGAVLMAET INPKYRGKVM GTVQSAWAVG WGLAVALFTL IYSLVPQEFA WRVMFFVGLL
PSLLIIWVRR NVPEPDSFQR LQKENAIPTR FLQSMAGIFR PELLRVTLLG GLLGLGAHGG
YHAVMTWLPT FLKTERNLSV LNSGGYLAVI ILAFWCGCVV SGLLIDRIGR RKNILLFALC
CVLTVQAYVF FPLTNTQMLF LGFPLGFFAA GIPASLGAFF NELYPADVRG AGVGFCYNFG
RVLSAVFPFL VGHMSESMSL GSAIGIDAGI AYGVAVIAAL CLPETRGRNL ESAPAPEMAG
AAAK
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