| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1287 |
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| Symbol | |
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| ID | 5869047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1433564 |
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| End bp | 1434829 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546386 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001667530 |
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| Protein GI | 167032299 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.102696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.683767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TAATGCTCAA AACCTCCCTC GGCGTTGCCG TTGCTCTTGC ATCCAGCCAA
CTGCTCGCCA GCGGCTTTGC GCTCAACGAA CAGAGCATCA GCAGCATGGG GACAGGTTTC
GCGGGACGTT CTTCTTCTGC CGATGATGCC AGCACCGTGT TTGGCAACCC TGCAGGCATG
TCCCGCCTCA AACGCGAACA ATTCACCGTG GGCGGCGCTG CCGTCATCGC CAAGTCCGAT
ATCTCGGGCC CGGGCAGCAA CCTCGGGGGG GAAACCGATG GTGACATGGT GCCTTTCGTT
GGCGTACCCA TGGGTTACTA CGTCAAGCCA ATCGATGACC ACTGGAGCGT CGGCTTCGGT
GTCTATGTAC CCTTCGGCCT GGTAACCGAC TACGGCAGCG ATGATGCCGC ACGTTACTGG
GGCAAGAAGA GCCACGTCGA GGTAGTCACC TTCCAGCCGA CCGTCAGCTA CGCCTTCAAC
GACAAGGTAT CTATCGGTTT CGGTCCTACC ATCAACCGCA TCAAGGGTGA GCTGGGCTCG
AGCCTGATCA ACCCGTTCAC CCCAGGCCGC AACGACGGCG AAGTAAAGAT CAAGGGTGAC
GATACCGCCG TTGGCTACAA CATCGGCGTT CTGGTACAGG CCACCGACCG TACCCGCGTC
GGCCTGACCT ATCACTCGAT GGTGGACTAC AAGCTCGAGG GCAAGACCCG CGTCAGCACC
CCGCTGATCG GGCCATTCAA CGGCAACAAG TTCGACGCCA GCTTGAAGAT CAAAACGCCT
GAGTCCGTCG ACCTCTCGGT TACCCATGAG CTGGACGACC AGTGGACCCT GTACGCAGGT
AGCACCTGGA CGCGCTGGAG CCGCCTGAAA GACATCACCG TGCAGAACGA TGTCCCCGCA
CCGCTGGCAG GCTCGGCGTT CCAGACCATT ACCGAGGAAC AGAACTGGCA TGACACCTGG
GCTCACGCCA TTGGTGCATC GTACAAGGTC AACAAGGAGT GGGTGCTGCG CACCGGCTTC
ACCGTCGACC AGTCGCCAAC CAACAACCAC GACCGCTCGC CACGCATCCC GACTGGCGAC
CGTAAAGTGT TCAGCGTGGG TGCTGGCTGG AGCCCGAGCG ACGACATGAC CATCGACGTT
GCCTACTCCT ACCTGTGGGA GGAGGACACC AAGGTCAACC AGGTCAGCGC GACCAAGGGC
AGCTACCAGG CCAAGTACGA GAACAGCGCT CACGGTATCG GTGCATCCCT CACCTACCGC
TTCTGA
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| Protein sequence | MKKVMLKTSL GVAVALASSQ LLASGFALNE QSISSMGTGF AGRSSSADDA STVFGNPAGM
SRLKREQFTV GGAAVIAKSD ISGPGSNLGG ETDGDMVPFV GVPMGYYVKP IDDHWSVGFG
VYVPFGLVTD YGSDDAARYW GKKSHVEVVT FQPTVSYAFN DKVSIGFGPT INRIKGELGS
SLINPFTPGR NDGEVKIKGD DTAVGYNIGV LVQATDRTRV GLTYHSMVDY KLEGKTRVST
PLIGPFNGNK FDASLKIKTP ESVDLSVTHE LDDQWTLYAG STWTRWSRLK DITVQNDVPA
PLAGSAFQTI TEEQNWHDTW AHAIGASYKV NKEWVLRTGF TVDQSPTNNH DRSPRIPTGD
RKVFSVGAGW SPSDDMTIDV AYSYLWEEDT KVNQVSATKG SYQAKYENSA HGIGASLTYR
F
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