| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1168 |
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| Symbol | ispD |
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| ID | 5868928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1326721 |
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| End bp | 1327428 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546268 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001667412 |
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| Protein GI | 167032181 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.69883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATA CCTTGCCGGC CTTCTGGGCC GTGATTCCTG CTGCGGGCGT TGGTGCCCGC
ATGGCTGCCG ACCGCCCCAA GCAATACCTG GAGCTGGCTG GGCAGACCCT TCTCGAGCAC
AGCCTCGATT GTTTTCTTGG CCACCCGGCG CTTGCAGGGG TGGTAGTCAG CATTGCCGAT
GACGACCCGT ATTGGCCTGG CCTGCGCTAC GCCAGCGACC CGCGCATCCA GCGCGCGGCA
GGTGGGCGTG AGCGCGCTGA CTCGGTGCTC AACGCCTTGC TGGTGCTGCA TGCCCAAGGG
GCCTCGGACA GCGATTGGGT ACTGGTGCAC GATGCCGCGC GGCCAAACCT GGCGCGCAGC
GACCTGGACA AGCTGTTGTC GGAATTGGCA GACGACCCGG TGGGTGGCCT GCTGGCGGTG
CCGGCGCGCG ATACCCTCAA GCGTGCCGAT GGCAATGGCC GGGTGAGCGC TACCGTGGAC
CGCAGCACCA TCTGGCAGGC GTATACGCCG CAGATGTTCC GCCTGGGTGC GTTGCACCGT
GCGTTGGCCG AGTGCCTGGT GTCGGATGTC GTGGTGACCG ATGAGGCTTC GGCCATCGAG
TGGTCCGGTC AAGCGCCGCG GCTGGTTGAA GGGCGAAGTG ACAACATCAA GGTGACCCGG
CCGGAAGACC TGGAGTGGTT GCGCCAGCGT TGGGCAGGGC GTCGCTAA
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| Protein sequence | MINTLPAFWA VIPAAGVGAR MAADRPKQYL ELAGQTLLEH SLDCFLGHPA LAGVVVSIAD
DDPYWPGLRY ASDPRIQRAA GGRERADSVL NALLVLHAQG ASDSDWVLVH DAARPNLARS
DLDKLLSELA DDPVGGLLAV PARDTLKRAD GNGRVSATVD RSTIWQAYTP QMFRLGALHR
ALAECLVSDV VVTDEASAIE WSGQAPRLVE GRSDNIKVTR PEDLEWLRQR WAGRR
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