| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1156 |
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| Symbol | lpxD |
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| ID | 5868916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1311765 |
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| End bp | 1312820 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546256 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001667400 |
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| Protein GI | 167032169 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.330648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA CCATGACGCT AGGCCAACTG GCCGAGGCCC TCGGTGCCAC CCTCAAGGGG
CCCGAGGCGC TGCAGATTAC CGGGCTGGCC ACCTTGCAAG AGGCTGGCCC CGGTCAGTTG
AGCTTCCTCG CCAACCCGCA GTACCGCAAG TACCTGGATA ACTGCCAGGC GGGTGCGGTA
TTGCTCAAGG CCGCGGATGC CGAGAGTTTC GCTGGCAATG CCCTGATCGT GGCCGACCCC
TACCAGGCGT ATGCGCGTAT TTCCCACCTG TTCGACCCTA AACCCAAGGC TGTGGCGGGA
ATCCATCCCA GCGCCGTGGT GGCTGAGGAC GCGCAGGTAG ACGCCAGCGC CAGCATCGGG
CCGTTCGCGG TCATCGAAAG TGGTGCACGT ATCGAGGCTG ATGTCAGCAT CGGCGCACAT
TGCTTCGTCG GTGCGCGTTG CGTTGTAGGT GAGGGCGGCT GGCTGGCGCC GCGGGTTACG
TTGTATCACG ACGTCACCAT CGGCAAGCGT GTGGTCATCC AGTCGGGTGC TGTGATCGGC
GGCGAAGGCT TCGGTTTTGC CAATGAGAAG GGCATCTGGC GCAAGATTGC CCAGATTGGT
GGCGTCACCA TTGGTGATGA CGTGGAAATC GGCGTCAATA CTGCCGTTGA CCGTGGTGCG
CTGTCCGACA CGCGGATCGG GGACGGGGTC AAGCTCGACA ACCAGATCCA GATCGCCCAC
AACGTGCAGA TCGGTGACCA CACGGCTATG GCCGCTTGCG TAGGCATCTC CGGCAGTACA
CGCATCGGCA AGCATTGCAT GCTGGCCGGC GGCGTGGGCC TGGTGGGGCA CATCGATATT
TGCGATAACG TATTTGTTTC CGGGATGACA ATGGTAACCC GTTCGATCAC CGAACCCGGT
TCCTATTCAT CCGGCACAGC CATGCAGCCT CTGGCTGACT GGCGCAAGAG CGCTGCGCGT
ATCCGCCAGC TGGATGACAT GGCCAAACGT CTTCAGCAGC TGGAAAAACG CGTCGATACC
GTGACCTCAG GTGGCCTGCC GACATCAGAA GGCTGA
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| Protein sequence | MSVTMTLGQL AEALGATLKG PEALQITGLA TLQEAGPGQL SFLANPQYRK YLDNCQAGAV
LLKAADAESF AGNALIVADP YQAYARISHL FDPKPKAVAG IHPSAVVAED AQVDASASIG
PFAVIESGAR IEADVSIGAH CFVGARCVVG EGGWLAPRVT LYHDVTIGKR VVIQSGAVIG
GEGFGFANEK GIWRKIAQIG GVTIGDDVEI GVNTAVDRGA LSDTRIGDGV KLDNQIQIAH
NVQIGDHTAM AACVGISGST RIGKHCMLAG GVGLVGHIDI CDNVFVSGMT MVTRSITEPG
SYSSGTAMQP LADWRKSAAR IRQLDDMAKR LQQLEKRVDT VTSGGLPTSE G
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