Gene PputGB1_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1105 
Symbol 
ID5868864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1254970 
End bp1255893 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID641546204 
Productlipoprotein 
Protein accessionYP_001667349 
Protein GI167032118 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCGA CTACGCGAAC ATTCTCTGAG TGCTGCCGCC TGCTGGCCCT GGGCGTGGTT 
CTGCTGGGGC TTGGCGGCTG CAGCAGCCTG CTGTTCTACC CCGAGCGTGG CCAGGCCTTC
ACCCCTGAGC GGGCCAAGCT GGCGTATCGC GATGTCACCC TGAACACTGC TGATGGCCTG
CGCCTGCACG GCTGGTGGCT GCCGGCCAAG GCCGGGGTCG ATGTCAAAGG CACGGTGCTG
CACCTGCATG GAAACGGCGG CAACCTGCCT GGACACCTGG GGGGGAGCTA CTGGCTGCCG
GAGCAGGGTT ACCAGGTGTT GATGATCGAT TATCGCGGCT ACGGCTTGTC CCAGGGCCAG
CCGAGCCTGC CGGACGTGTA CCAGGACATT GCCGCCGCCA TGGTTTGGCT GAACCAGGCA
CCCGAGGTAA AGGGCAAGCC ACTGGTGCTG CTGGGGCAGA GCCTGGGTGG CGCCATGGCC
ATTCATTATC TGGCGGCCCA CCCTGAGCAG CGCCAGCGCT TCAGCGCGCT GGTGTTCGAT
GGCGTGCCGG CCAGTTACCG CGAGGTGGGG CGCTATGCCC TCAGCACCTC GTGGATGACT
TGGCCGCTGC AGGTGCCGCT GTCGTGGCTG GTGCCGGACG GCGACAGCGC GATCCGTTCG
ATCGAGCAGC TAAGCAGCCC GCCCAAACTG TTCTTCCACA GCATCGACGA CAACCTGGTG
CCGATGGACA ACGGCATTCG CCTGTACCAG CACGCACCAG CACCAAGGGT GCTGCAACTG
ACCCGAGGCG GCCATGTACA GACCTTCGCT GACCCAACCT GGCGCCAGGT GATGCTGCGT
TTCCTTGATG ACCCCAGCCA TTTCAACGGC CTGCGGCGGC TTGCCGAAGT GCCCAATTTC
CCTGACGAGA AGAACAAGCA ATGA
 
Protein sequence
MKPTTRTFSE CCRLLALGVV LLGLGGCSSL LFYPERGQAF TPERAKLAYR DVTLNTADGL 
RLHGWWLPAK AGVDVKGTVL HLHGNGGNLP GHLGGSYWLP EQGYQVLMID YRGYGLSQGQ
PSLPDVYQDI AAAMVWLNQA PEVKGKPLVL LGQSLGGAMA IHYLAAHPEQ RQRFSALVFD
GVPASYREVG RYALSTSWMT WPLQVPLSWL VPDGDSAIRS IEQLSSPPKL FFHSIDDNLV
PMDNGIRLYQ HAPAPRVLQL TRGGHVQTFA DPTWRQVMLR FLDDPSHFNG LRRLAEVPNF
PDEKNKQ