Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1105 |
Symbol | |
ID | 5868864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1254970 |
End bp | 1255893 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546204 |
Product | lipoprotein |
Protein accession | YP_001667349 |
Protein GI | 167032118 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCCGA CTACGCGAAC ATTCTCTGAG TGCTGCCGCC TGCTGGCCCT GGGCGTGGTT CTGCTGGGGC TTGGCGGCTG CAGCAGCCTG CTGTTCTACC CCGAGCGTGG CCAGGCCTTC ACCCCTGAGC GGGCCAAGCT GGCGTATCGC GATGTCACCC TGAACACTGC TGATGGCCTG CGCCTGCACG GCTGGTGGCT GCCGGCCAAG GCCGGGGTCG ATGTCAAAGG CACGGTGCTG CACCTGCATG GAAACGGCGG CAACCTGCCT GGACACCTGG GGGGGAGCTA CTGGCTGCCG GAGCAGGGTT ACCAGGTGTT GATGATCGAT TATCGCGGCT ACGGCTTGTC CCAGGGCCAG CCGAGCCTGC CGGACGTGTA CCAGGACATT GCCGCCGCCA TGGTTTGGCT GAACCAGGCA CCCGAGGTAA AGGGCAAGCC ACTGGTGCTG CTGGGGCAGA GCCTGGGTGG CGCCATGGCC ATTCATTATC TGGCGGCCCA CCCTGAGCAG CGCCAGCGCT TCAGCGCGCT GGTGTTCGAT GGCGTGCCGG CCAGTTACCG CGAGGTGGGG CGCTATGCCC TCAGCACCTC GTGGATGACT TGGCCGCTGC AGGTGCCGCT GTCGTGGCTG GTGCCGGACG GCGACAGCGC GATCCGTTCG ATCGAGCAGC TAAGCAGCCC GCCCAAACTG TTCTTCCACA GCATCGACGA CAACCTGGTG CCGATGGACA ACGGCATTCG CCTGTACCAG CACGCACCAG CACCAAGGGT GCTGCAACTG ACCCGAGGCG GCCATGTACA GACCTTCGCT GACCCAACCT GGCGCCAGGT GATGCTGCGT TTCCTTGATG ACCCCAGCCA TTTCAACGGC CTGCGGCGGC TTGCCGAAGT GCCCAATTTC CCTGACGAGA AGAACAAGCA ATGA
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Protein sequence | MKPTTRTFSE CCRLLALGVV LLGLGGCSSL LFYPERGQAF TPERAKLAYR DVTLNTADGL RLHGWWLPAK AGVDVKGTVL HLHGNGGNLP GHLGGSYWLP EQGYQVLMID YRGYGLSQGQ PSLPDVYQDI AAAMVWLNQA PEVKGKPLVL LGQSLGGAMA IHYLAAHPEQ RQRFSALVFD GVPASYREVG RYALSTSWMT WPLQVPLSWL VPDGDSAIRS IEQLSSPPKL FFHSIDDNLV PMDNGIRLYQ HAPAPRVLQL TRGGHVQTFA DPTWRQVMLR FLDDPSHFNG LRRLAEVPNF PDEKNKQ
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