| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1068 |
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| Symbol | rimM |
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| ID | 5868827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1215577 |
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| End bp | 1216113 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641546167 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001667312 |
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| Protein GI | 167032081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.185683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA CGCCAGAAAA GGCTGACGAC CTGATCGTCG TTGGCAAGAT TTTTTCGGTT
CACGGCGTTC GCGGCGAGGT GAAGGTGTAT TCCTTTACCG ATCCGATTGA AAACCTGTTG
GATTATCCGC GCTGGACGCT TCGGCACGAA GGCAAGGTAA AGCAGGTCGA GCTGGTCAGC
GGTCGTGGCT CCCAAAAGGG CCTGGTCGTG AAGCTCAAAG GCCTCGAAGA TCGCGATGAA
GCCCGTCTTC TGAGCGGTTA CGAAATCTGC ATTGCGCGGA GCCTTTTGCC CAACCTGGCT
GCCGACGAGT ACTACTGGTA CCAGTTGGTC GGTCTGAAGG TCATCAACCA GGACGAACAC
CTGTTCGGCA AGGTCGATCA CCTGTTGGAG ACCGGTGCGA ACGATGTAAT GGTGGTCAAA
CCCTGCGCAG GCAGCCTGGA TGATCGCGAG CGTCTGTTGC CCTATACGGC GCAATGCGTG
CTGGCAATCG ACCTGGAAGC AGGCGTGATG CGGGTTGAGT GGGACGCGGA CTTCTAA
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| Protein sequence | MNATPEKADD LIVVGKIFSV HGVRGEVKVY SFTDPIENLL DYPRWTLRHE GKVKQVELVS
GRGSQKGLVV KLKGLEDRDE ARLLSGYEIC IARSLLPNLA ADEYYWYQLV GLKVINQDEH
LFGKVDHLLE TGANDVMVVK PCAGSLDDRE RLLPYTAQCV LAIDLEAGVM RVEWDADF
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