| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1053 |
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| Symbol | |
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| ID | 5868813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1199022 |
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| End bp | 1203548 |
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| Gene Length | 4527 bp |
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| Protein Length | 1508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546154 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001667299 |
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| Protein GI | 167032068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.21388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC TCTCGCAGTT ACCACCTATC CGCCCAAATA TCTTGCGCTG GTCCATCTTC
CTCACGTTGC TGGGCCCCAG CGCCGCTCTG GCCCAGAACG GCCTGGATGC AACAGCCGGC
CCGGCAGGCA CCCCGATCAT CCACAACGGC CATGGGGTAC CGGTCATCGA CATCGTGCCG
CCCAACGCCA GCGGGCTGTC GCACAACCAG TTCATCGACT ACAACGTTGG CACCCCTGGC
TTGGTGTTGA ACAACGCCAC CGAGGCCGGG CGGTCGCAGC TGGCCGGTGC CCTGGCGGCC
AACCCGCAGT TTCAGGGCCA GGCCGCCTCG ACCATCCTCA ACGAAGTGGT CAGCCGCAAC
GCCTCGTTGA TCGAAGGGCC ACAGGAAATC TTCGGGCGCC CGGCCGACTA CATCCTGGCC
AACCCCAATG GCATCACCCT CAATGGCGGC AGCTTCATCA ACACCACCCG TGCTGGCTTC
GTGGTGGGAA CCCCGGCTTT CGAAGAGCAG CAGCTCAAAT ACCTGGACAC ACTCACGGCC
AGCGGCACCC TCCAGGTACT GGAAAATGGC CAGAGCAATG CCAGTGGCGC GCTCGAGCTG
ATTGCACCGC GCGTGGACAG CAAAGGCCTG CTCACGGCCG GCGAAGCGCT CAACATCACG
GTTGGTCGCA ACCGTGTGGA CAGTCGCAGT GGCGACGTTG TGGAACACCT GCCCAGCCCC
TCTTCGAGCA TTGATGCCAG CCTGTTCGGT GCAATGCGCG CTGGGCGTAT CCGTGTGGTG
AGCACTGCCG AAGGCGCGGG AGTGCGCATG GGGGCATCAC AGGTCATGGG CACCGAGGGC
GTCGACATCC AATCGGCAGG CGGTTTGCAT ATCAGCGGCA AAGTCGACAA CCCCACCGAG
CTACGTAGCG AGCGCGGTAC ACTGAAACTC ACCGCTGCCG ATGACCTGAT ACTTGATGCG
GTCAACGGCC AGGCCGCAAG CATCGAAGCC CGCGCCGGCA AGAAGCTCAC ACTGGACGCC
CAGACCCGCA AGCACATCGA GCACAACAAC GACAGCTGGA ACAAGAAGTT CTTGTTCATC
ACCCGCGAAA CCTACAGCCG CAAAACCACC ACCACTCACC AACAGCAGCA GGGCAGTCAA
TTGCAGGGCA GCGACAGCGT GCTGTTGCAG TCTGGCGAGG ACATGCGCCT GGCTGCAGCA
AAGGTGGACG CAGGCAACGA GCTGATCGTC GACAGTGGCG CCGGCCTGGA CATCGTGGCC
GGCATCGATA GCCAGCGCAC TGAAGAGCAG GTGCGCCACC GCAAGGATTT ATGGCGCGGT
GACAGCGATA CCGACCAGCT CAAGGAAACC GCAAAGGGCA GTACGCTCGG CGCCAAGCAC
ATGGCGATCA AGGCAAGCGG CAAGCTCGAT GTGCAAGGCA GCAGCCTGCA CAGCCGCGGC
GATTTGGCCA TCCAGGCAAA ACAGGCAGAC ATCGGCACCA CCACATTGCA GGAACGCGGA
ACCAAACGCG ACTATCGCGG CGACCTGGTA TCGGGCACCT TCTTTGGTGA TCGCCAAGGC
AAGGACACCG AGGGCAAGGC CGTTGCAGGC AGCACGGTCG CCAGCGAGGG CAAGCTCACC
GTGGCTGCCG AGCAGGTCGC TATCACCGGC AGCAGCGTGC ACGGCAAGCA GGACGCCGTG
CTCTACAGCG AAAAAGGTTC GCTGGCCATC GAGGCAGACC ACGCCAGCAG CACCTCCACC
AACCGCTCCA GCGACAGCAA ACTGTTCGGC CTGATTGGCA GCGAACACGA AGGTACAGAC
CGCAAACAGC AGGTGCTGGT CAGCGACGTC AGCTCGGCCA GCAACCTGCG CCTGGCCAGT
GCCGAAGAAT TGCGCATTCA GGGTGCCAAG GTCGAAGCGG GCAAACACCT GCAAGTGGAG
GCCAAAGGCG ACCTGCTGAT TGGCAGTGCA CAATCGGTCG ATGAACGCGA AACCCGCGAC
CAGCAACGCG GCTTCACGGC CAGCGCCAGG CAAACCCAGG AAGCCGAGGA TGGCAAGCCA
GAATCCCGCC AGTACGCGGC TGGCGTGGCA TATGAGGTCG CCAACAGCAC CAGCAAGCAG
CGCACCACCC ACCAGGTTGC CAGTGAGCTC AAGGGCGCCT CGGTGGGCAT GAACAGTGGC
GCGCACCTGC AGGTAAAGGG CAGCAAGGTC CAGGCCACTG CCGGCGACCT CGACGTACAG
GCTCAGGAAG TGACGCTGGG TGCGGCCCGT AATGAGCGTG ACGCGACCAC CACTACCACC
CATAGCGGTG GCGGGTTGAC GGTAACCGGC GGCATCGACC GCTTGGGCAG TCTGTTCGAA
GGCCATCACA ACCGTGAGGT GCAGACCGAG CGCGAGAGCA AGGTGCAGCG CAGCGCGTTG
CAGGCCAGCG GCGATCTGAA ATTGCGCAGT GATGCACTGC TCACCGAGAC CGCGCACGTC
GAGGCCGGCA ACTCCCTGCA GGTGACCGCC GAACGCATCG ATAACCGCGC GCTGCAGGAT
ACCCAGGAAC ATGAACAAAG CCGCGACAAC TGGTCTGCCA GCCTGGGCGC CAGTGTCGAG
TACCGCGACC TTACCCGCCC CATCGAACGC CTGGTGCTGG GTGAGGAAGC CGCACGCTTC
CAGCAAGCCT CGCCCGAAGA TGCCATGGCG CCACCCAGCA TCGGTGCCGA CATGACCGTC
GAACACCTCA AGCGCCTGGA AAACCAGCGT CGCAGCTTGG CTCGGGTGAG CGAGTTTTCC
GGGGCCAAGG TCGAGGTCAA GGCCGACACC CTCGCAGACC AGGGAACAGC TTGGCAGGCC
AACGCCGGCG CGCTGCAGAT CGAGGCGCAG CAGCACCAGA TGCACGCGGC CGAGAACACC
CAGGAAGTGA CCGTGCAACG CCTGGCCTAT GGCGGCGACG TGCGCCTGGA CACCAGCACC
GGCGAGGACC TGAACGTACG CGCCGCTGGC CAGGGAGGGT CGCTGGAAAG CAAGGATATC
GGCAGCACCG CCGTGCCCGG CAGCCTGTAC GGGCAACAGG GTATCCAGGT ACAGCTGGGC
AGCGATGGGC GCTACGAAGG GGCCCGCATC GATGGCGGCG AAGGTAGCGT GGTCATGCAC
AGTGCTGGCT CGCTAACCTT GTCACAGGCG ACCGACCAGG CCGAACAACA GGCACGCCAG
CTCGATGGCA ATGCCTGGGC CAAAGTTGGC AACCGTCCAG GCAGCACCGG CGTCAATGGC
CGTGGCTATC TCGACCACAG TCAAACGCTG AGCACGCAGA GCACGGCTCA AGTGGCACAA
GTCGACGCCA AGGGCGAGGT GCGACTGACC AGCGGTGCCG ACCTGCTGCT CGAAGGTACC
CGCATTGGCA GCCGCGAGGC CAAGGTTGGC GACATCCTGG TGCAGAGCGG CGGCCAACTG
CGGGTCAAGG CGGCCAGCAA TACCCAGCAA GCCACGGGCG CCAAGCTGGG CGGCGGCCTG
GAGCTGGCGG TCAAGGCAGG CACGACCAAG GGGGGAGCAT TGGGTGGCCA CTTCAGCCAC
GGCAAACAGG AAGAAAATGC ACACCAGGCG ATTGATGCCC AGTTTGCCAG CAACGGCGCA
CTGACCCTGA GCAGCAACGC CCGCGAGGAT ATCGCCCTGC ACCTGCAAGG CCTTCAGGCC
TCGGCCGAAC GAATGACCCT CGACGCTTCG AACGGCGGCA TGCTGGTGGA AGCCTCTTCC
AACCAGGAGC GACGCGACAA CCTCGACATC ACCGCCGGCG CCGGTTTCGA CATGGCCAAG
GGCGCGCTGG ATACCCGCGG CCTGCATGGC CGCCTCAAGG TAGAGTTCGA CAAGCGCGAC
AACCTCACCT GGAATGCCAA TGACCTGCGC GCCGAGCGCA TCGACCTGCA AAGCCGCGGC
GATACCCGCA TCGAAGGCGC CACCCTGGTA GCGGGGCATA TTGGTGGCGT GATCGACGGT
GACCTGCGTA TCGCCAGCCG CAAGGACCGC GTCGACACCC TGAGCGTCAA AGGGGATGCC
AGGCTGAGCC AGGAGAAAAA CCCACAGGGC TATGTCAACG CGGCCACTTC GGTGGCCGGG
CCTCTGGGGG GCAAGGTCGA GAAAAAAGCC GGCTCCGCCT TGAGCAAGGC AGACCCAGGG
CTCTCGCCGA CCCTAAGCCT CGACGTTTCG CACGTGCAGC GTGACAGCGT GGCCCATCAG
GCCACGCTCA AAGGCAGCGA TGGTATCGAC CTGCAGGTGG GTGGCAACGC TCATCTGGTG
GGGGCACGTT TGCAGTCGGC CAGGGGCGCC GTGGGGCTCG ACGCCGACTC GATCACTCAA
GAAACGCTGA GCGGTAATGA CTATCGCCGG GACGTATCGA TCGATGCGTC CAACTCACCG
GTGGACCTGG GCACGGCAAT CGCCGATATG GCCAAGGGCA AAGGGGCAGC GGATGGCGAG
AATGCGCTGG ACCTTGGGTT GTTGAGAACC AGTGGGCATA GCCGCAGCGA GCAATGGGCT
TCGAGTGTGC AGGGCAAGAA GCAATAG
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| Protein sequence | MQTLSQLPPI RPNILRWSIF LTLLGPSAAL AQNGLDATAG PAGTPIIHNG HGVPVIDIVP
PNASGLSHNQ FIDYNVGTPG LVLNNATEAG RSQLAGALAA NPQFQGQAAS TILNEVVSRN
ASLIEGPQEI FGRPADYILA NPNGITLNGG SFINTTRAGF VVGTPAFEEQ QLKYLDTLTA
SGTLQVLENG QSNASGALEL IAPRVDSKGL LTAGEALNIT VGRNRVDSRS GDVVEHLPSP
SSSIDASLFG AMRAGRIRVV STAEGAGVRM GASQVMGTEG VDIQSAGGLH ISGKVDNPTE
LRSERGTLKL TAADDLILDA VNGQAASIEA RAGKKLTLDA QTRKHIEHNN DSWNKKFLFI
TRETYSRKTT TTHQQQQGSQ LQGSDSVLLQ SGEDMRLAAA KVDAGNELIV DSGAGLDIVA
GIDSQRTEEQ VRHRKDLWRG DSDTDQLKET AKGSTLGAKH MAIKASGKLD VQGSSLHSRG
DLAIQAKQAD IGTTTLQERG TKRDYRGDLV SGTFFGDRQG KDTEGKAVAG STVASEGKLT
VAAEQVAITG SSVHGKQDAV LYSEKGSLAI EADHASSTST NRSSDSKLFG LIGSEHEGTD
RKQQVLVSDV SSASNLRLAS AEELRIQGAK VEAGKHLQVE AKGDLLIGSA QSVDERETRD
QQRGFTASAR QTQEAEDGKP ESRQYAAGVA YEVANSTSKQ RTTHQVASEL KGASVGMNSG
AHLQVKGSKV QATAGDLDVQ AQEVTLGAAR NERDATTTTT HSGGGLTVTG GIDRLGSLFE
GHHNREVQTE RESKVQRSAL QASGDLKLRS DALLTETAHV EAGNSLQVTA ERIDNRALQD
TQEHEQSRDN WSASLGASVE YRDLTRPIER LVLGEEAARF QQASPEDAMA PPSIGADMTV
EHLKRLENQR RSLARVSEFS GAKVEVKADT LADQGTAWQA NAGALQIEAQ QHQMHAAENT
QEVTVQRLAY GGDVRLDTST GEDLNVRAAG QGGSLESKDI GSTAVPGSLY GQQGIQVQLG
SDGRYEGARI DGGEGSVVMH SAGSLTLSQA TDQAEQQARQ LDGNAWAKVG NRPGSTGVNG
RGYLDHSQTL STQSTAQVAQ VDAKGEVRLT SGADLLLEGT RIGSREAKVG DILVQSGGQL
RVKAASNTQQ ATGAKLGGGL ELAVKAGTTK GGALGGHFSH GKQEENAHQA IDAQFASNGA
LTLSSNARED IALHLQGLQA SAERMTLDAS NGGMLVEASS NQERRDNLDI TAGAGFDMAK
GALDTRGLHG RLKVEFDKRD NLTWNANDLR AERIDLQSRG DTRIEGATLV AGHIGGVIDG
DLRIASRKDR VDTLSVKGDA RLSQEKNPQG YVNAATSVAG PLGGKVEKKA GSALSKADPG
LSPTLSLDVS HVQRDSVAHQ ATLKGSDGID LQVGGNAHLV GARLQSARGA VGLDADSITQ
ETLSGNDYRR DVSIDASNSP VDLGTAIADM AKGKGAADGE NALDLGLLRT SGHSRSEQWA
SSVQGKKQ
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