| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1039 |
|---|
| Symbol | |
|---|
| ID | 5868799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1185223 |
|---|
| End bp | 1186188 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641546140 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_001667285 |
|---|
| Protein GI | 167032054 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGCA GGCAACAGCA GGGGGCGGCC CTGTTGATGG TGATGGTGGT GCTGGCGATG
CTGGCGGCGG GCATGGCTTG GTTGGTGGAA GATGGTCGGC GCCAGGTGGA TGAGGTGCGT
CTGTTGCAGC AGCGGGTGCA GGTGCGCGCC ATGGAACAGG CGGGCCTTGC CTATGCCGAG
CAGGCTCTGC GGGACCCCGC CTGGCGGCTT AGCCCATTGT TCTGGCAAGC CTTGCGCGGG
CAGCCACTGA ACTACGATTT TGGCACGGGC CAGGCGCAAT TGCGGGTGCG CGACCAGCAC
ACATGCTTCA ACGTCAATGC GTTGCTGGGT GCCGATGGCG AACGTGCCGA GCACCAATTG
CGTTATCTGC TGGGCGACGA CATGGCTGCC GAGCGCCTGG TCGATGCACT GGCCGACTGG
CTCGACGCCG ACAGTGATAC CCGTCTGCAG GGCGCCGAGA GTGCCCAGTA CCTGCGTCAG
CAACCCGCAC GGCTGGCGGC CAATCAGCCG ATGCTCGACA CCAGCGAGCT GAACCTGTTG
CTGGAGCCGG ATGCCGCTCG CCAGGCTCGT TATCCGATGC TGTGCGCCTT GCCCCAGGTC
ACCGGCTGGC GCCTGAATGC CAATGCGCTG GGGCTGGAGC ACCTACCGTT GCTGGAAGCG
CTGTACGAAG GGCGCTATTC GCGCTCTTTG CTCAGCCGCA TCATCACCGG GCGACCGGCG
TCGGGGTATG CGGATGCGGC CGCGTTGCGC CAGGCGCTGG GGGCGGTGGA TGACGAGACG
TTCGAACGAC TGAGTGAAGG CTTGCTGCTC AACAGTGGGT ACTTCCTGTT GCAGCTGTCG
TTCGAAGAGG AGGGCAGGAT GATGCGCAGC GAGTTTCAGG TAGAGGCGCT TGGGGTGGTG
CAATGGCATG CGCGGGTGCC AGCACAGCAG GTGCGGGTGC GTAGCCGGGA GCCCATGGCC
TGGTAA
|
|---|
| Protein sequence | MGGRQQQGAA LLMVMVVLAM LAAGMAWLVE DGRRQVDEVR LLQQRVQVRA MEQAGLAYAE
QALRDPAWRL SPLFWQALRG QPLNYDFGTG QAQLRVRDQH TCFNVNALLG ADGERAEHQL
RYLLGDDMAA ERLVDALADW LDADSDTRLQ GAESAQYLRQ QPARLAANQP MLDTSELNLL
LEPDAARQAR YPMLCALPQV TGWRLNANAL GLEHLPLLEA LYEGRYSRSL LSRIITGRPA
SGYADAAALR QALGAVDDET FERLSEGLLL NSGYFLLQLS FEEEGRMMRS EFQVEALGVV
QWHARVPAQQ VRVRSREPMA W
|
|---|
| |